JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2bjqa1.name2015-04-17 18:04 0 Job name flag file
[ ]jp_AAtetbL.align2015-04-17 19:44 16KPSIBLAST alignment in FASTA format
[TXT]jp_AAtetbL.als2015-04-17 19:44 3.2KAlscript command file for PS/PDF output
[ ]jp_AAtetbL.blast.gz2015-04-17 19:44 43KCompressed PSIBLAST output file
[TXT]jp_AAtetbL.coils.csv2015-04-17 19:44 1.0KCOILS output in CSV format
[ ]jp_AAtetbL.coilseq.lupas_142015-04-17 19:44 7.1KCOILS output, window length 14
[ ]jp_AAtetbL.coilseq.lupas_212015-04-17 19:44 7.1KCOILS output, window length 21
[ ]jp_AAtetbL.coilseq.lupas_282015-04-17 19:44 7.1KCOILS output, window length 28
[ ]jp_AAtetbL.concise2015-04-17 19:44 38KPrediction: coiled-coil, solvent, alignment
[ ]jp_AAtetbL.concise.blc2015-04-17 19:44 18KBLC format prediction and alignment data
[ ]jp_AAtetbL.concise.fasta2015-04-17 19:44 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_AAtetbL.concise.pdf2015-04-17 19:44 108KPDF prediction and alignment data
[ ]jp_AAtetbL.concise.ps2015-04-17 19:44 2.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_AAtetbL.fasta2015-04-17 19:42 185 Input query sequence in FASTA format
[ ]jp_AAtetbL.full_MSA.fasta2015-04-17 19:44 54KFull MSA before JPred filters in FASTA
[TXT]jp_AAtetbL.full_MSA.fasta.noGaps.html2015-04-17 19:44 42KFull MSA before JPred filters in FASTA
[TXT]jp_AAtetbL.full_MSA.fasta.withGaps.html2015-04-17 19:44 257KFull MSA before JPred filters in FASTA
[ ]jp_AAtetbL.hmm2015-04-17 19:44 32KHHMer2 profile of the alignment
[TXT]jp_AAtetbL.html2015-04-17 19:44 48KHTML prediction and alignment data
[ ]jp_AAtetbL.input2015-04-17 18:04 177 Raw input data for analysis
[ ]jp_AAtetbL.jalview2015-04-17 19:44 4.2KJalview annotation file for alignment
[ ]jp_AAtetbL.jnet2015-04-17 19:44 6.3KJnet secondary structure output
[TXT]jp_AAtetbL.profile2015-04-17 19:43 27KPSIBLAST profile from alignment
[ ]jp_AAtetbL.pssm2015-04-17 19:44 37KPSIBLAST PSSM for Jnet
[TXT]jp_AAtetbL.results.html2016-02-15 12:19 76KJPred results page
[TXT]jp_AAtetbL.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_AAtetbL.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_AAtetbL.seq2015-04-17 18:04 185 Sequence data file
[TXT]jp_AAtetbL.simple.html2015-04-17 19:44 1.5KBrief HTML: sequence and prediction only
[TXT]jp_AAtetbL.svg.html2015-04-17 19:44 68KJalview SVG summary of results
[ ]jp_AAtetbL.tar.gz2015-04-17 19:44 235KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.