JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:54 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2blna2.name2015-04-17 16:15 0 Job name flag file
[ ]jp_i6jfKj6.align2015-04-17 16:53 190KPSIBLAST alignment in FASTA format
[TXT]jp_i6jfKj6.als2015-04-17 16:53 3.4KAlscript command file for PS/PDF output
[ ]jp_i6jfKj6.blast.gz2015-04-17 16:52 9.2MCompressed PSIBLAST output file
[TXT]jp_i6jfKj6.coils.csv2015-04-17 16:53 1.2KCOILS output in CSV format
[ ]jp_i6jfKj6.coilseq.lupas_142015-04-17 16:53 8.3KCOILS output, window length 14
[ ]jp_i6jfKj6.coilseq.lupas_212015-04-17 16:53 8.3KCOILS output, window length 21
[ ]jp_i6jfKj6.coilseq.lupas_282015-04-17 16:53 8.3KCOILS output, window length 28
[ ]jp_i6jfKj6.concise2015-04-17 16:53 375KPrediction: coiled-coil, solvent, alignment
[ ]jp_i6jfKj6.concise.blc2015-04-17 16:53 191KBLC format prediction and alignment data
[ ]jp_i6jfKj6.concise.fasta2015-04-17 16:53 192KPrediction: coiled-coil, solvent, alignment
[ ]jp_i6jfKj6.concise.pdf2015-04-17 16:54 1.3MPDF prediction and alignment data
[ ]jp_i6jfKj6.concise.ps2015-04-17 16:53 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_i6jfKj6.fasta2015-04-17 16:41 212 Input query sequence in FASTA format
[ ]jp_i6jfKj6.full_MSA.fasta2015-04-17 16:53 16MFull MSA before JPred filters in FASTA
[TXT]jp_i6jfKj6.full_MSA.fasta.noGaps.html2015-04-17 16:54 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_i6jfKj6.full_MSA.fasta.withGaps.html2015-04-17 16:54 52MFull MSA before JPred filters in FASTA
[ ]jp_i6jfKj6.hmm2015-04-17 16:53 37KHHMer2 profile of the alignment
[TXT]jp_i6jfKj6.html2015-04-17 16:53 379KHTML prediction and alignment data
[ ]jp_i6jfKj6.input2015-04-17 16:15 204 Raw input data for analysis
[ ]jp_i6jfKj6.jalview2015-04-17 16:53 4.8KJalview annotation file for alignment
[ ]jp_i6jfKj6.jnet2015-04-17 16:53 7.2KJnet secondary structure output
[TXT]jp_i6jfKj6.profile2015-04-17 16:51 32KPSIBLAST profile from alignment
[ ]jp_i6jfKj6.pssm2015-04-17 16:53 42KPSIBLAST PSSM for Jnet
[TXT]jp_i6jfKj6.results.html2016-02-15 12:19 89KJPred results page
[TXT]jp_i6jfKj6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_i6jfKj6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_i6jfKj6.seq2015-04-17 16:15 212 Sequence data file
[TXT]jp_i6jfKj6.simple.html2015-04-17 16:53 1.7KBrief HTML: sequence and prediction only
[TXT]jp_i6jfKj6.svg.html2015-04-17 16:54 81KJalview SVG summary of results
[ ]jp_i6jfKj6.tar.gz2015-04-17 16:54 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.