JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:49 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2bv4a_.name2015-04-17 16:15 0 Job name flag file
[ ]jp_KP6cbcn.align2015-04-17 16:49 4.9KPSIBLAST alignment in FASTA format
[TXT]jp_KP6cbcn.als2015-04-17 16:49 2.3KAlscript command file for PS/PDF output
[ ]jp_KP6cbcn.blast.gz2015-04-17 16:49 13KCompressed PSIBLAST output file
[TXT]jp_KP6cbcn.coils.csv2015-04-17 16:49 708 COILS output in CSV format
[ ]jp_KP6cbcn.coilseq.lupas_142015-04-17 16:49 4.7KCOILS output, window length 14
[ ]jp_KP6cbcn.coilseq.lupas_212015-04-17 16:49 4.7KCOILS output, window length 21
[ ]jp_KP6cbcn.coilseq.lupas_282015-04-17 16:49 4.7KCOILS output, window length 28
[ ]jp_KP6cbcn.concise2015-04-17 16:49 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_KP6cbcn.concise.blc2015-04-17 16:49 6.6KBLC format prediction and alignment data
[ ]jp_KP6cbcn.concise.fasta2015-04-17 16:49 6.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_KP6cbcn.concise.pdf2015-04-17 16:49 41KPDF prediction and alignment data
[ ]jp_KP6cbcn.concise.ps2015-04-17 16:49 744KPrediction: coiled-coil, solvent, alignment
[ ]jp_KP6cbcn.fasta2015-04-17 16:41 127 Input query sequence in FASTA format
[ ]jp_KP6cbcn.full_MSA.fasta2015-04-17 16:49 12KFull MSA before JPred filters in FASTA
[TXT]jp_KP6cbcn.full_MSA.fasta.noGaps.html2015-04-17 16:49 13KFull MSA before JPred filters in FASTA
[TXT]jp_KP6cbcn.full_MSA.fasta.withGaps.html2015-04-17 16:49 66KFull MSA before JPred filters in FASTA
[ ]jp_KP6cbcn.hmm2015-04-17 16:49 21KHHMer2 profile of the alignment
[TXT]jp_KP6cbcn.html2015-04-17 16:49 23KHTML prediction and alignment data
[ ]jp_KP6cbcn.input2015-04-17 16:15 120 Raw input data for analysis
[ ]jp_KP6cbcn.jalview2015-04-17 16:49 3.0KJalview annotation file for alignment
[ ]jp_KP6cbcn.jnet2015-04-17 16:49 4.2KJnet secondary structure output
[TXT]jp_KP6cbcn.profile2015-04-17 16:45 18KPSIBLAST profile from alignment
[ ]jp_KP6cbcn.pssm2015-04-17 16:49 24KPSIBLAST PSSM for Jnet
[TXT]jp_KP6cbcn.results.html2016-02-15 12:19 54KJPred results page
[TXT]jp_KP6cbcn.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KP6cbcn.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KP6cbcn.seq2015-04-17 16:15 127 Sequence data file
[TXT]jp_KP6cbcn.simple.html2015-04-17 16:49 1.3KBrief HTML: sequence and prediction only
[TXT]jp_KP6cbcn.svg.html2015-04-17 16:49 46KJalview SVG summary of results
[ ]jp_KP6cbcn.tar.gz2015-04-17 16:49 102KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.