JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:32 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2c71a1.name2015-04-17 16:16 0 Job name flag file
[ ]jp_lEpHdqa.align2015-04-17 17:30 224KPSIBLAST alignment in FASTA format
[TXT]jp_lEpHdqa.als2015-04-17 17:30 3.4KAlscript command file for PS/PDF output
[ ]jp_lEpHdqa.blast.gz2015-04-17 17:28 15MCompressed PSIBLAST output file
[TXT]jp_lEpHdqa.coils.csv2015-04-17 17:30 1.2KCOILS output in CSV format
[ ]jp_lEpHdqa.coilseq.lupas_142015-04-17 17:30 8.6KCOILS output, window length 14
[ ]jp_lEpHdqa.coilseq.lupas_212015-04-17 17:30 8.6KCOILS output, window length 21
[ ]jp_lEpHdqa.coilseq.lupas_282015-04-17 17:30 8.6KCOILS output, window length 28
[ ]jp_lEpHdqa.concise2015-04-17 17:30 441KPrediction: coiled-coil, solvent, alignment
[ ]jp_lEpHdqa.concise.blc2015-04-17 17:30 224KBLC format prediction and alignment data
[ ]jp_lEpHdqa.concise.fasta2015-04-17 17:30 226KPrediction: coiled-coil, solvent, alignment
[ ]jp_lEpHdqa.concise.pdf2015-04-17 17:31 1.5MPDF prediction and alignment data
[ ]jp_lEpHdqa.concise.ps2015-04-17 17:30 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_lEpHdqa.fasta2015-04-17 16:41 219 Input query sequence in FASTA format
[ ]jp_lEpHdqa.full_MSA.fasta2015-04-17 17:29 17MFull MSA before JPred filters in FASTA
[TXT]jp_lEpHdqa.full_MSA.fasta.noGaps.html2015-04-17 17:32 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_lEpHdqa.full_MSA.fasta.withGaps.html2015-04-17 17:32 48MFull MSA before JPred filters in FASTA
[ ]jp_lEpHdqa.hmm2015-04-17 17:30 38KHHMer2 profile of the alignment
[TXT]jp_lEpHdqa.html2015-04-17 17:30 436KHTML prediction and alignment data
[ ]jp_lEpHdqa.input2015-04-17 16:16 211 Raw input data for analysis
[ ]jp_lEpHdqa.jalview2015-04-17 17:30 4.9KJalview annotation file for alignment
[ ]jp_lEpHdqa.jnet2015-04-17 17:30 7.5KJnet secondary structure output
[TXT]jp_lEpHdqa.profile2015-04-17 17:16 33KPSIBLAST profile from alignment
[ ]jp_lEpHdqa.pssm2015-04-17 17:30 44KPSIBLAST PSSM for Jnet
[TXT]jp_lEpHdqa.results.html2016-02-15 12:19 91KJPred results page
[TXT]jp_lEpHdqa.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_lEpHdqa.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_lEpHdqa.seq2015-04-17 16:16 219 Sequence data file
[TXT]jp_lEpHdqa.simple.html2015-04-17 17:30 1.6KBrief HTML: sequence and prediction only
[TXT]jp_lEpHdqa.svg.html2015-04-17 17:32 83KJalview SVG summary of results
[ ]jp_lEpHdqa.tar.gz2015-04-17 17:32 22MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.