JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2c9wa1.name2015-04-17 16:49 0 Job name flag file
[ ]jp_Jpr_Zwg.align2015-04-17 17:42 21KPSIBLAST alignment in FASTA format
[TXT]jp_Jpr_Zwg.als2015-04-17 17:42 1.6KAlscript command file for PS/PDF output
[ ]jp_Jpr_Zwg.blast.gz2015-04-17 17:42 109KCompressed PSIBLAST output file
[TXT]jp_Jpr_Zwg.coils.csv2015-04-17 17:42 330 COILS output in CSV format
[ ]jp_Jpr_Zwg.coilseq.lupas_142015-04-17 17:42 2.1KCOILS output, window length 14
[ ]jp_Jpr_Zwg.coilseq.lupas_212015-04-17 17:42 2.1KCOILS output, window length 21
[ ]jp_Jpr_Zwg.coilseq.lupas_282015-04-17 17:42 2.1KCOILS output, window length 28
[ ]jp_Jpr_Zwg.concise2015-04-17 17:42 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_Jpr_Zwg.concise.blc2015-04-17 17:42 22KBLC format prediction and alignment data
[ ]jp_Jpr_Zwg.concise.fasta2015-04-17 17:42 22KPrediction: coiled-coil, solvent, alignment
[ ]jp_Jpr_Zwg.concise.pdf2015-04-17 17:42 139KPDF prediction and alignment data
[ ]jp_Jpr_Zwg.concise.ps2015-04-17 17:42 2.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_Jpr_Zwg.fasta2015-04-17 17:40 63 Input query sequence in FASTA format
[ ]jp_Jpr_Zwg.full_MSA.fasta2015-04-17 17:42 184KFull MSA before JPred filters in FASTA
[TXT]jp_Jpr_Zwg.full_MSA.fasta.noGaps.html2015-04-17 17:42 158KFull MSA before JPred filters in FASTA
[TXT]jp_Jpr_Zwg.full_MSA.fasta.withGaps.html2015-04-17 17:42 874KFull MSA before JPred filters in FASTA
[ ]jp_Jpr_Zwg.hmm2015-04-17 17:42 9.4KHHMer2 profile of the alignment
[TXT]jp_Jpr_Zwg.html2015-04-17 17:42 88KHTML prediction and alignment data
[ ]jp_Jpr_Zwg.input2015-04-17 16:49 57 Raw input data for analysis
[ ]jp_Jpr_Zwg.jalview2015-04-17 17:42 1.8KJalview annotation file for alignment
[ ]jp_Jpr_Zwg.jnet2015-04-17 17:42 1.9KJnet secondary structure output
[TXT]jp_Jpr_Zwg.profile2015-04-17 17:42 8.4KPSIBLAST profile from alignment
[ ]jp_Jpr_Zwg.pssm2015-04-17 17:42 11KPSIBLAST PSSM for Jnet
[TXT]jp_Jpr_Zwg.results.html2016-02-15 12:19 31KJPred results page
[TXT]jp_Jpr_Zwg.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Jpr_Zwg.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Jpr_Zwg.seq2015-04-17 16:49 63 Sequence data file
[TXT]jp_Jpr_Zwg.simple.html2015-04-17 17:42 1.0KBrief HTML: sequence and prediction only
[TXT]jp_Jpr_Zwg.svg.html2015-04-17 17:42 23KJalview SVG summary of results
[ ]jp_Jpr_Zwg.tar.gz2015-04-17 17:43 365KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.