JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2ci1a_.name2015-04-17 15:36 0 Job name flag file
[ ]jp_FPLwpUH.align2015-04-17 15:51 249KPSIBLAST alignment in FASTA format
[TXT]jp_FPLwpUH.als2015-04-17 15:51 4.9KAlscript command file for PS/PDF output
[ ]jp_FPLwpUH.blast.gz2015-04-17 15:49 4.6MCompressed PSIBLAST output file
[TXT]jp_FPLwpUH.coils.csv2015-04-17 15:51 1.6KCOILS output in CSV format
[ ]jp_FPLwpUH.coilseq.lupas_142015-04-17 15:51 12KCOILS output, window length 14
[ ]jp_FPLwpUH.coilseq.lupas_212015-04-17 15:51 12KCOILS output, window length 21
[ ]jp_FPLwpUH.coilseq.lupas_282015-04-17 15:51 12KCOILS output, window length 28
[ ]jp_FPLwpUH.concise2015-04-17 15:51 495KPrediction: coiled-coil, solvent, alignment
[ ]jp_FPLwpUH.concise.blc2015-04-17 15:51 250KBLC format prediction and alignment data
[ ]jp_FPLwpUH.concise.fasta2015-04-17 15:51 252KPrediction: coiled-coil, solvent, alignment
[ ]jp_FPLwpUH.concise.pdf2015-04-17 15:51 1.8MPDF prediction and alignment data
[ ]jp_FPLwpUH.concise.ps2015-04-17 15:51 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_FPLwpUH.fasta2015-04-17 15:46 291 Input query sequence in FASTA format
[ ]jp_FPLwpUH.full_MSA.fasta2015-04-17 15:50 14MFull MSA before JPred filters in FASTA
[TXT]jp_FPLwpUH.full_MSA.fasta.noGaps.html2015-04-17 15:51 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_FPLwpUH.full_MSA.fasta.withGaps.html2015-04-17 15:51 33MFull MSA before JPred filters in FASTA
[ ]jp_FPLwpUH.hmm2015-04-17 15:51 52KHHMer2 profile of the alignment
[TXT]jp_FPLwpUH.html2015-04-17 15:51 440KHTML prediction and alignment data
[ ]jp_FPLwpUH.input2015-04-17 15:36 282 Raw input data for analysis
[ ]jp_FPLwpUH.jalview2015-04-17 15:51 6.3KJalview annotation file for alignment
[ ]jp_FPLwpUH.jnet2015-04-17 15:51 10KJnet secondary structure output
[TXT]jp_FPLwpUH.profile2015-04-17 15:48 44KPSIBLAST profile from alignment
[ ]jp_FPLwpUH.pssm2015-04-17 15:51 59KPSIBLAST PSSM for Jnet
[TXT]jp_FPLwpUH.results.html2016-02-15 12:19 121KJPred results page
[TXT]jp_FPLwpUH.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_FPLwpUH.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_FPLwpUH.seq2015-04-17 15:36 291 Sequence data file
[TXT]jp_FPLwpUH.simple.html2015-04-17 15:51 2.0KBrief HTML: sequence and prediction only
[TXT]jp_FPLwpUH.svg.html2015-04-17 15:51 113KJalview SVG summary of results
[ ]jp_FPLwpUH.tar.gz2015-04-17 15:52 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.