JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2ciwa1.name2015-04-17 16:49 0 Job name flag file
[ ]jp_CfMKKeq.align2015-04-17 17:43 183KPSIBLAST alignment in FASTA format
[TXT]jp_CfMKKeq.als2015-04-17 17:43 2.9KAlscript command file for PS/PDF output
[ ]jp_CfMKKeq.blast.gz2015-04-17 17:43 957KCompressed PSIBLAST output file
[TXT]jp_CfMKKeq.coils.csv2015-04-17 17:43 1.8KCOILS output in CSV format
[ ]jp_CfMKKeq.coilseq.lupas_142015-04-17 17:43 13KCOILS output, window length 14
[ ]jp_CfMKKeq.coilseq.lupas_212015-04-17 17:43 13KCOILS output, window length 21
[ ]jp_CfMKKeq.coilseq.lupas_282015-04-17 17:43 13KCOILS output, window length 28
[ ]jp_CfMKKeq.concise2015-04-17 17:43 369KPrediction: coiled-coil, solvent, alignment
[ ]jp_CfMKKeq.concise.blc2015-04-17 17:43 185KBLC format prediction and alignment data
[ ]jp_CfMKKeq.concise.fasta2015-04-17 17:43 186KPrediction: coiled-coil, solvent, alignment
[ ]jp_CfMKKeq.concise.pdf2015-04-17 17:44 1.2MPDF prediction and alignment data
[ ]jp_CfMKKeq.concise.ps2015-04-17 17:43 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_CfMKKeq.fasta2015-04-17 17:40 316 Input query sequence in FASTA format
[ ]jp_CfMKKeq.full_MSA.fasta2015-04-17 17:43 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_CfMKKeq.full_MSA.fasta.noGaps.html2015-04-17 17:44 346KFull MSA before JPred filters in FASTA
[TXT]jp_CfMKKeq.full_MSA.fasta.withGaps.html2015-04-17 17:44 5.8MFull MSA before JPred filters in FASTA
[ ]jp_CfMKKeq.hmm2015-04-17 17:43 56KHHMer2 profile of the alignment
[TXT]jp_CfMKKeq.html2015-04-17 17:43 318KHTML prediction and alignment data
[ ]jp_CfMKKeq.input2015-04-17 16:49 306 Raw input data for analysis
[ ]jp_CfMKKeq.jalview2015-04-17 17:43 6.7KJalview annotation file for alignment
[ ]jp_CfMKKeq.jnet2015-04-17 17:43 11KJnet secondary structure output
[TXT]jp_CfMKKeq.profile2015-04-17 17:42 48KPSIBLAST profile from alignment
[ ]jp_CfMKKeq.pssm2015-04-17 17:43 64KPSIBLAST PSSM for Jnet
[TXT]jp_CfMKKeq.results.html2016-02-15 12:19 123KJPred results page
[TXT]jp_CfMKKeq.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_CfMKKeq.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_CfMKKeq.seq2015-04-17 16:49 316 Sequence data file
[TXT]jp_CfMKKeq.simple.html2015-04-17 17:43 1.7KBrief HTML: sequence and prediction only
[TXT]jp_CfMKKeq.svg.html2015-04-17 17:44 115KJalview SVG summary of results
[ ]jp_CfMKKeq.tar.gz2015-04-17 17:44 2.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.