JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:48 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2cxya_.name2015-04-17 17:28 0 Job name flag file
[ ]jp_6w7xi7M.align2015-04-17 18:47 70KPSIBLAST alignment in FASTA format
[TXT]jp_6w7xi7M.als2015-04-17 18:47 2.0KAlscript command file for PS/PDF output
[ ]jp_6w7xi7M.blast.gz2015-04-17 18:47 1.4MCompressed PSIBLAST output file
[TXT]jp_6w7xi7M.coils.csv2015-04-17 18:47 714 COILS output in CSV format
[ ]jp_6w7xi7M.coilseq.lupas_142015-04-17 18:47 4.8KCOILS output, window length 14
[ ]jp_6w7xi7M.coilseq.lupas_212015-04-17 18:47 4.8KCOILS output, window length 21
[ ]jp_6w7xi7M.coilseq.lupas_282015-04-17 18:47 4.8KCOILS output, window length 28
[ ]jp_6w7xi7M.concise2015-04-17 18:47 137KPrediction: coiled-coil, solvent, alignment
[ ]jp_6w7xi7M.concise.blc2015-04-17 18:47 70KBLC format prediction and alignment data
[ ]jp_6w7xi7M.concise.fasta2015-04-17 18:47 71KPrediction: coiled-coil, solvent, alignment
[ ]jp_6w7xi7M.concise.pdf2015-04-17 18:47 448KPDF prediction and alignment data
[ ]jp_6w7xi7M.concise.ps2015-04-17 18:47 8.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_6w7xi7M.fasta2015-04-17 18:40 128 Input query sequence in FASTA format
[ ]jp_6w7xi7M.full_MSA.fasta2015-04-17 18:47 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_6w7xi7M.full_MSA.fasta.noGaps.html2015-04-17 18:47 649KFull MSA before JPred filters in FASTA
[TXT]jp_6w7xi7M.full_MSA.fasta.withGaps.html2015-04-17 18:47 8.6MFull MSA before JPred filters in FASTA
[ ]jp_6w7xi7M.hmm2015-04-17 18:47 21KHHMer2 profile of the alignment
[TXT]jp_6w7xi7M.html2015-04-17 18:47 183KHTML prediction and alignment data
[ ]jp_6w7xi7M.input2015-04-17 17:28 121 Raw input data for analysis
[ ]jp_6w7xi7M.jalview2015-04-17 18:47 3.1KJalview annotation file for alignment
[ ]jp_6w7xi7M.jnet2015-04-17 18:47 4.2KJnet secondary structure output
[TXT]jp_6w7xi7M.profile2015-04-17 18:44 19KPSIBLAST profile from alignment
[ ]jp_6w7xi7M.pssm2015-04-17 18:47 24KPSIBLAST PSSM for Jnet
[TXT]jp_6w7xi7M.results.html2016-02-15 12:19 55KJPred results page
[TXT]jp_6w7xi7M.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_6w7xi7M.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_6w7xi7M.seq2015-04-17 17:28 128 Sequence data file
[TXT]jp_6w7xi7M.simple.html2015-04-17 18:47 1.2KBrief HTML: sequence and prediction only
[TXT]jp_6w7xi7M.svg.html2015-04-17 18:47 47KJalview SVG summary of results
[ ]jp_6w7xi7M.tar.gz2015-04-17 18:48 2.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.