A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 17:00 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2cyja1.name | 2015-04-17 16:17 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_X9Za7WU.align | 2015-04-17 17:00 | 114K | PSIBLAST alignment in FASTA format |
| jp_X9Za7WU.als | 2015-04-17 17:00 | 2.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_X9Za7WU.blast.gz | 2015-04-17 16:59 | 282K | Compressed PSIBLAST output file |
| jp_X9Za7WU.coils.csv | 2015-04-17 17:00 | 738 | COILS output in CSV format |
| jp_X9Za7WU.coilseq.lupas_14 | 2015-04-17 17:00 | 5.0K | COILS output, window length 14 |
| jp_X9Za7WU.coilseq.lupas_21 | 2015-04-17 17:00 | 5.0K | COILS output, window length 21 |
| jp_X9Za7WU.coilseq.lupas_28 | 2015-04-17 17:00 | 5.0K | COILS output, window length 28 |
| jp_X9Za7WU.concise | 2015-04-17 17:00 | 221K | Prediction: coiled-coil, solvent, alignment |
| jp_X9Za7WU.concise.blc | 2015-04-17 17:00 | 114K | BLC format prediction and alignment data |
| jp_X9Za7WU.concise.fasta | 2015-04-17 17:00 | 115K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_X9Za7WU.concise.pdf | 2015-04-17 17:00 | 737K | PDF prediction and alignment data |
| jp_X9Za7WU.concise.ps | 2015-04-17 17:00 | 13M | Prediction: coiled-coil, solvent, alignment |
| jp_X9Za7WU.fasta | 2015-04-17 16:43 | 132 | Input query sequence in FASTA format |
| jp_X9Za7WU.full_MSA.fasta | 2015-04-17 16:59 | 897K | Full MSA before JPred filters in FASTA |
| jp_X9Za7WU.full_MSA.fasta.noGaps.html | 2015-04-17 17:00 | 285K | Full MSA before JPred filters in FASTA |
| jp_X9Za7WU.full_MSA.fasta.withGaps.html | 2015-04-17 17:00 | 3.6M | Full MSA before JPred filters in FASTA |
| jp_X9Za7WU.hmm | 2015-04-17 17:00 | 22K | HHMer2 profile of the alignment |
| jp_X9Za7WU.html | 2015-04-17 17:00 | 287K | HTML prediction and alignment data |
| jp_X9Za7WU.input | 2015-04-17 16:17 | 125 | Raw input data for analysis |
| jp_X9Za7WU.jalview | 2015-04-17 17:00 | 3.2K | Jalview annotation file for alignment |
| jp_X9Za7WU.jnet | 2015-04-17 17:00 | 4.4K | Jnet secondary structure output |
| jp_X9Za7WU.profile | 2015-04-17 16:58 | 19K | PSIBLAST profile from alignment |
| jp_X9Za7WU.pssm | 2015-04-17 17:00 | 25K | PSIBLAST PSSM for Jnet |
| jp_X9Za7WU.results.html | 2016-02-15 12:19 | 57K | JPred results page |
| jp_X9Za7WU.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_X9Za7WU.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_X9Za7WU.seq | 2015-04-17 16:17 | 132 | Sequence data file |
| jp_X9Za7WU.simple.html | 2015-04-17 17:00 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_X9Za7WU.svg.html) | jp_X9Za7WU.svg.html | 2015-04-17 17:00 | 49K | Jalview SVG summary of results |
| jp_X9Za7WU.tar.gz | 2015-04-17 17:00 | 1.5M | Archive containing complete results |
