JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:48 4.9KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2d00a1.name2015-04-17 18:40 0 Job name flag file
[ ]jp_t5ZdoJc.align2015-04-17 20:48 86KPSIBLAST alignment in FASTA format
[TXT]jp_t5ZdoJc.als2015-04-17 20:48 2.4KAlscript command file for PS/PDF output
[ ]jp_t5ZdoJc.blast.gz2015-04-17 20:48 282KCompressed PSIBLAST output file
[TXT]jp_t5ZdoJc.coils.csv2015-04-17 20:48 654 COILS output in CSV format
[ ]jp_t5ZdoJc.coilseq.lupas_142015-04-17 20:48 4.4KCOILS output, window length 14
[ ]jp_t5ZdoJc.coilseq.lupas_212015-04-17 20:48 4.4KCOILS output, window length 21
[ ]jp_t5ZdoJc.coilseq.lupas_282015-04-17 20:48 4.4KCOILS output, window length 28
[ ]jp_t5ZdoJc.concise2015-04-17 20:48 167KPrediction: coiled-coil, solvent, alignment
[ ]jp_t5ZdoJc.concise.blc2015-04-17 20:48 86KBLC format prediction and alignment data
[ ]jp_t5ZdoJc.concise.fasta2015-04-17 20:48 87KPrediction: coiled-coil, solvent, alignment
[ ]jp_t5ZdoJc.concise.pdf2015-04-17 20:48 2.2KPDF prediction and alignment data
[ ]jp_t5ZdoJc.concise.ps2015-04-17 20:48 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_t5ZdoJc.fasta2015-04-17 20:41 118 Input query sequence in FASTA format
[ ]jp_t5ZdoJc.full_MSA.fasta2015-04-17 20:48 636KFull MSA before JPred filters in FASTA
[TXT]jp_t5ZdoJc.full_MSA.fasta.noGaps.html2015-04-17 20:48 240KFull MSA before JPred filters in FASTA
[TXT]jp_t5ZdoJc.full_MSA.fasta.withGaps.html2015-04-17 20:48 2.0MFull MSA before JPred filters in FASTA
[ ]jp_t5ZdoJc.hmm2015-04-17 20:48 20KHHMer2 profile of the alignment
[TXT]jp_t5ZdoJc.html2015-04-17 20:48 234KHTML prediction and alignment data
[ ]jp_t5ZdoJc.input2015-04-17 18:40 111 Raw input data for analysis
[ ]jp_t5ZdoJc.jalview2015-04-17 20:48 2.9KJalview annotation file for alignment
[ ]jp_t5ZdoJc.jnet2015-04-17 20:48 3.9KJnet secondary structure output
[TXT]jp_t5ZdoJc.profile2015-04-17 20:46 17KPSIBLAST profile from alignment
[ ]jp_t5ZdoJc.pssm2015-04-17 20:48 22KPSIBLAST PSSM for Jnet
[TXT]jp_t5ZdoJc.results.html2016-02-15 12:19 52KJPred results page
[TXT]jp_t5ZdoJc.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_t5ZdoJc.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_t5ZdoJc.seq2015-04-17 18:40 118 Sequence data file
[TXT]jp_t5ZdoJc.simple.html2015-04-17 20:48 1.3KBrief HTML: sequence and prediction only
[TXT]jp_t5ZdoJc.svg.html2015-04-17 20:48 44KJalview SVG summary of results
[ ]jp_t5ZdoJc.tar.gz2015-04-17 20:48 779KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.