JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:49 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2d28c1.name2015-04-17 18:04 0 Job name flag file
[ ]jp_cB5VWBe.align2015-04-17 19:49 139KPSIBLAST alignment in FASTA format
[TXT]jp_cB5VWBe.als2015-04-17 19:49 2.8KAlscript command file for PS/PDF output
[ ]jp_cB5VWBe.blast.gz2015-04-17 19:48 1.9MCompressed PSIBLAST output file
[TXT]jp_cB5VWBe.coils.csv2015-04-17 19:49 894 COILS output in CSV format
[ ]jp_cB5VWBe.coilseq.lupas_142015-04-17 19:49 6.0KCOILS output, window length 14
[ ]jp_cB5VWBe.coilseq.lupas_212015-04-17 19:49 6.0KCOILS output, window length 21
[ ]jp_cB5VWBe.coilseq.lupas_282015-04-17 19:49 6.0KCOILS output, window length 28
[ ]jp_cB5VWBe.concise2015-04-17 19:49 273KPrediction: coiled-coil, solvent, alignment
[ ]jp_cB5VWBe.concise.blc2015-04-17 19:49 140KBLC format prediction and alignment data
[ ]jp_cB5VWBe.concise.fasta2015-04-17 19:49 141KPrediction: coiled-coil, solvent, alignment
[ ]jp_cB5VWBe.concise.pdf2015-04-17 19:49 1.0MPDF prediction and alignment data
[ ]jp_cB5VWBe.concise.ps2015-04-17 19:49 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_cB5VWBe.fasta2015-04-17 19:43 159 Input query sequence in FASTA format
[ ]jp_cB5VWBe.full_MSA.fasta2015-04-17 19:48 4.2MFull MSA before JPred filters in FASTA
[TXT]jp_cB5VWBe.full_MSA.fasta.noGaps.html2015-04-17 19:49 872KFull MSA before JPred filters in FASTA
[TXT]jp_cB5VWBe.full_MSA.fasta.withGaps.html2015-04-17 19:49 14MFull MSA before JPred filters in FASTA
[ ]jp_cB5VWBe.hmm2015-04-17 19:49 27KHHMer2 profile of the alignment
[TXT]jp_cB5VWBe.html2015-04-17 19:49 320KHTML prediction and alignment data
[ ]jp_cB5VWBe.input2015-04-17 18:04 151 Raw input data for analysis
[ ]jp_cB5VWBe.jalview2015-04-17 19:49 3.7KJalview annotation file for alignment
[ ]jp_cB5VWBe.jnet2015-04-17 19:49 5.3KJnet secondary structure output
[TXT]jp_cB5VWBe.profile2015-04-17 19:46 23KPSIBLAST profile from alignment
[ ]jp_cB5VWBe.pssm2015-04-17 19:49 31KPSIBLAST PSSM for Jnet
[TXT]jp_cB5VWBe.results.html2016-02-15 12:19 69KJPred results page
[TXT]jp_cB5VWBe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_cB5VWBe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_cB5VWBe.seq2015-04-17 18:04 159 Sequence data file
[TXT]jp_cB5VWBe.simple.html2015-04-17 19:49 1.4KBrief HTML: sequence and prediction only
[TXT]jp_cB5VWBe.svg.html2015-04-17 19:49 61KJalview SVG summary of results
[ ]jp_cB5VWBe.tar.gz2015-04-17 19:49 4.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.