JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2db7a1.name2015-04-17 18:40 0 Job name flag file
[ ]jp_KBAYcAv.align2015-04-17 20:43 12KPSIBLAST alignment in FASTA format
[TXT]jp_KBAYcAv.als2015-04-17 20:43 1.6KAlscript command file for PS/PDF output
[ ]jp_KBAYcAv.blast.gz2015-04-17 20:43 54KCompressed PSIBLAST output file
[TXT]jp_KBAYcAv.coils.csv2015-04-17 20:43 360 COILS output in CSV format
[ ]jp_KBAYcAv.coilseq.lupas_142015-04-17 20:43 2.3KCOILS output, window length 14
[ ]jp_KBAYcAv.coilseq.lupas_212015-04-17 20:43 2.3KCOILS output, window length 21
[ ]jp_KBAYcAv.coilseq.lupas_282015-04-17 20:43 2.3KCOILS output, window length 28
[ ]jp_KBAYcAv.concise2015-04-17 20:43 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_KBAYcAv.concise.blc2015-04-17 20:43 13KBLC format prediction and alignment data
[ ]jp_KBAYcAv.concise.fasta2015-04-17 20:43 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_KBAYcAv.concise.pdf2015-04-17 20:43 70KPDF prediction and alignment data
[ ]jp_KBAYcAv.concise.ps2015-04-17 20:43 1.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_KBAYcAv.fasta2015-04-17 20:41 68 Input query sequence in FASTA format
[ ]jp_KBAYcAv.full_MSA.fasta2015-04-17 20:43 67KFull MSA before JPred filters in FASTA
[TXT]jp_KBAYcAv.full_MSA.fasta.noGaps.html2015-04-17 20:43 104KFull MSA before JPred filters in FASTA
[TXT]jp_KBAYcAv.full_MSA.fasta.withGaps.html2015-04-17 20:43 387KFull MSA before JPred filters in FASTA
[ ]jp_KBAYcAv.hmm2015-04-17 20:43 10KHHMer2 profile of the alignment
[TXT]jp_KBAYcAv.html2015-04-17 20:43 51KHTML prediction and alignment data
[ ]jp_KBAYcAv.input2015-04-17 18:40 62 Raw input data for analysis
[ ]jp_KBAYcAv.jalview2015-04-17 20:43 1.9KJalview annotation file for alignment
[ ]jp_KBAYcAv.jnet2015-04-17 20:43 2.1KJnet secondary structure output
[TXT]jp_KBAYcAv.profile2015-04-17 20:43 9.2KPSIBLAST profile from alignment
[ ]jp_KBAYcAv.pssm2015-04-17 20:43 12KPSIBLAST PSSM for Jnet
[TXT]jp_KBAYcAv.results.html2016-02-15 12:19 33KJPred results page
[TXT]jp_KBAYcAv.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KBAYcAv.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KBAYcAv.seq2015-04-17 18:40 68 Sequence data file
[TXT]jp_KBAYcAv.simple.html2015-04-17 20:43 1.0KBrief HTML: sequence and prediction only
[TXT]jp_KBAYcAv.svg.html2015-04-17 20:43 25KJalview SVG summary of results
[ ]jp_KBAYcAv.tar.gz2015-04-17 20:43 198KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.