JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2deja2.name2015-04-17 15:37 0 Job name flag file
[ ]jp_u6wYuli.align2015-04-17 15:50 152KPSIBLAST alignment in FASTA format
[TXT]jp_u6wYuli.als2015-04-17 15:50 2.6KAlscript command file for PS/PDF output
[ ]jp_u6wYuli.blast.gz2015-04-17 15:49 3.5MCompressed PSIBLAST output file
[TXT]jp_u6wYuli.coils.csv2015-04-17 15:50 1.0KCOILS output in CSV format
[ ]jp_u6wYuli.coilseq.lupas_142015-04-17 15:50 7.1KCOILS output, window length 14
[ ]jp_u6wYuli.coilseq.lupas_212015-04-17 15:50 7.1KCOILS output, window length 21
[ ]jp_u6wYuli.coilseq.lupas_282015-04-17 15:50 7.1KCOILS output, window length 28
[ ]jp_u6wYuli.concise2015-04-17 15:50 299KPrediction: coiled-coil, solvent, alignment
[ ]jp_u6wYuli.concise.blc2015-04-17 15:50 152KBLC format prediction and alignment data
[ ]jp_u6wYuli.concise.fasta2015-04-17 15:50 154KPrediction: coiled-coil, solvent, alignment
[ ]jp_u6wYuli.concise.pdf2015-04-17 15:50 1.0MPDF prediction and alignment data
[ ]jp_u6wYuli.concise.ps2015-04-17 15:50 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_u6wYuli.fasta2015-04-17 15:46 183 Input query sequence in FASTA format
[ ]jp_u6wYuli.full_MSA.fasta2015-04-17 15:50 6.5MFull MSA before JPred filters in FASTA
[TXT]jp_u6wYuli.full_MSA.fasta.noGaps.html2015-04-17 15:50 910KFull MSA before JPred filters in FASTA
[TXT]jp_u6wYuli.full_MSA.fasta.withGaps.html2015-04-17 15:50 17MFull MSA before JPred filters in FASTA
[ ]jp_u6wYuli.hmm2015-04-17 15:50 32KHHMer2 profile of the alignment
[TXT]jp_u6wYuli.html2015-04-17 15:50 328KHTML prediction and alignment data
[ ]jp_u6wYuli.input2015-04-17 15:37 175 Raw input data for analysis
[ ]jp_u6wYuli.jalview2015-04-17 15:50 4.2KJalview annotation file for alignment
[ ]jp_u6wYuli.jnet2015-04-17 15:50 6.2KJnet secondary structure output
[TXT]jp_u6wYuli.profile2015-04-17 15:49 27KPSIBLAST profile from alignment
[ ]jp_u6wYuli.pssm2015-04-17 15:50 36KPSIBLAST PSSM for Jnet
[TXT]jp_u6wYuli.results.html2016-02-15 12:19 76KJPred results page
[TXT]jp_u6wYuli.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_u6wYuli.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_u6wYuli.seq2015-04-17 15:37 183 Sequence data file
[TXT]jp_u6wYuli.simple.html2015-04-17 15:50 1.4KBrief HTML: sequence and prediction only
[TXT]jp_u6wYuli.svg.html2015-04-17 15:51 68KJalview SVG summary of results
[ ]jp_u6wYuli.tar.gz2015-04-17 15:51 6.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.