JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_4DUpVuo.als2015-04-17 20:48 2.4KAlscript command file for PS/PDF output
[ ]jp_4DUpVuo.tar.gz2015-04-17 20:49 1.4MArchive containing complete results
[ ]jp_4DUpVuo.concise.blc2015-04-17 20:48 97KBLC format prediction and alignment data
[TXT]jp_4DUpVuo.simple.html2015-04-17 20:48 1.3KBrief HTML: sequence and prediction only
[TXT]jp_4DUpVuo.coils.csv2015-04-17 20:48 738 COILS output in CSV format
[ ]jp_4DUpVuo.coilseq.lupas_142015-04-17 20:48 5.0KCOILS output, window length 14
[ ]jp_4DUpVuo.coilseq.lupas_212015-04-17 20:48 5.0KCOILS output, window length 21
[ ]jp_4DUpVuo.coilseq.lupas_282015-04-17 20:48 5.0KCOILS output, window length 28
[ ]jp_4DUpVuo.blast.gz2015-04-17 20:48 371KCompressed PSIBLAST output file
[ ]jp_4DUpVuo.full_MSA.fasta2015-04-17 20:48 718KFull MSA before JPred filters in FASTA
[TXT]jp_4DUpVuo.full_MSA.fasta.noGaps.html2015-04-17 20:48 220KFull MSA before JPred filters in FASTA
[TXT]jp_4DUpVuo.full_MSA.fasta.withGaps.html2015-04-17 20:48 2.3MFull MSA before JPred filters in FASTA
[ ]jp_4DUpVuo.hmm2015-04-17 20:48 22KHHMer2 profile of the alignment
[TXT]jp_4DUpVuo.html2015-04-17 20:48 250KHTML prediction and alignment data
[TXT]jp_4DUpVuo.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_4DUpVuo.fasta2015-04-17 20:42 132 Input query sequence in FASTA format
[TXT]jp_4DUpVuo.results.html2016-02-15 12:19 57KJPred results page
[TXT]LOG2015-04-17 20:49 4.7KJPred server log file
[TXT]jp_4DUpVuo.svg.html2015-04-17 20:49 49KJalview SVG summary of results
[ ]jp_4DUpVuo.jalview2015-04-17 20:48 3.3KJalview annotation file for alignment
[TXT]jp_4DUpVuo.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_4DUpVuo.jnet2015-04-17 20:48 4.4KJnet secondary structure output
[TXT]d2dm9a1.name2015-04-17 18:41 0 Job name flag file
[ ]jp_4DUpVuo.concise.pdf2015-04-17 20:48 658KPDF prediction and alignment data
[ ]jp_4DUpVuo.pssm2015-04-17 20:48 25KPSIBLAST PSSM for Jnet
[ ]jp_4DUpVuo.align2015-04-17 20:48 97KPSIBLAST alignment in FASTA format
[TXT]jp_4DUpVuo.profile2015-04-17 20:46 19KPSIBLAST profile from alignment
[ ]jp_4DUpVuo.concise2015-04-17 20:48 190KPrediction: coiled-coil, solvent, alignment
[ ]jp_4DUpVuo.concise.fasta2015-04-17 20:48 98KPrediction: coiled-coil, solvent, alignment
[ ]jp_4DUpVuo.concise.ps2015-04-17 20:48 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_4DUpVuo.input2015-04-17 18:41 125 Raw input data for analysis
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[ ]jp_4DUpVuo.seq2015-04-17 18:41 132 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.