JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:11 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2dpla2.name2015-04-17 15:37 0 Job name flag file
[ ]jp_wECS1dh.align2015-04-17 16:11 48KPSIBLAST alignment in FASTA format
[TXT]jp_wECS1dh.als2015-04-17 16:11 2.3KAlscript command file for PS/PDF output
[ ]jp_wECS1dh.blast.gz2015-04-17 16:10 1.9MCompressed PSIBLAST output file
[TXT]jp_wECS1dh.coils.csv2015-04-17 16:11 744 COILS output in CSV format
[ ]jp_wECS1dh.coilseq.lupas_142015-04-17 16:11 5.0KCOILS output, window length 14
[ ]jp_wECS1dh.coilseq.lupas_212015-04-17 16:11 5.0KCOILS output, window length 21
[ ]jp_wECS1dh.coilseq.lupas_282015-04-17 16:11 5.0KCOILS output, window length 28
[ ]jp_wECS1dh.concise2015-04-17 16:11 96KPrediction: coiled-coil, solvent, alignment
[ ]jp_wECS1dh.concise.blc2015-04-17 16:11 49KBLC format prediction and alignment data
[ ]jp_wECS1dh.concise.fasta2015-04-17 16:11 49KPrediction: coiled-coil, solvent, alignment
[ ]jp_wECS1dh.concise.pdf2015-04-17 16:11 323KPDF prediction and alignment data
[ ]jp_wECS1dh.concise.ps2015-04-17 16:11 5.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_wECS1dh.fasta2015-04-17 15:47 133 Input query sequence in FASTA format
[ ]jp_wECS1dh.full_MSA.fasta2015-04-17 16:10 3.7MFull MSA before JPred filters in FASTA
[TXT]jp_wECS1dh.full_MSA.fasta.noGaps.html2015-04-17 16:11 772KFull MSA before JPred filters in FASTA
[TXT]jp_wECS1dh.full_MSA.fasta.withGaps.html2015-04-17 16:11 9.8MFull MSA before JPred filters in FASTA
[ ]jp_wECS1dh.hmm2015-04-17 16:11 22KHHMer2 profile of the alignment
[TXT]jp_wECS1dh.html2015-04-17 16:11 128KHTML prediction and alignment data
[ ]jp_wECS1dh.input2015-04-17 15:37 126 Raw input data for analysis
[ ]jp_wECS1dh.jalview2015-04-17 16:11 3.2KJalview annotation file for alignment
[ ]jp_wECS1dh.jnet2015-04-17 16:11 4.4KJnet secondary structure output
[TXT]jp_wECS1dh.profile2015-04-17 16:02 19KPSIBLAST profile from alignment
[ ]jp_wECS1dh.pssm2015-04-17 16:11 26KPSIBLAST PSSM for Jnet
[TXT]jp_wECS1dh.results.html2016-02-15 12:19 56KJPred results page
[TXT]jp_wECS1dh.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_wECS1dh.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_wECS1dh.seq2015-04-17 15:37 133 Sequence data file
[TXT]jp_wECS1dh.simple.html2015-04-17 16:11 1.3KBrief HTML: sequence and prediction only
[TXT]jp_wECS1dh.svg.html2015-04-17 16:11 48KJalview SVG summary of results
[ ]jp_wECS1dh.tar.gz2015-04-17 16:11 3.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.