JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:46 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2dxua2.name2015-04-17 16:17 0 Job name flag file
[ ]jp_5ZmKBk4.align2015-04-17 16:46 10KPSIBLAST alignment in FASTA format
[TXT]jp_5ZmKBk4.als2015-04-17 16:46 1.8KAlscript command file for PS/PDF output
[ ]jp_5ZmKBk4.blast.gz2015-04-17 16:46 13KCompressed PSIBLAST output file
[TXT]jp_5ZmKBk4.coils.csv2015-04-17 16:46 288 COILS output in CSV format
[ ]jp_5ZmKBk4.coilseq.lupas_142015-04-17 16:46 1.8KCOILS output, window length 14
[ ]jp_5ZmKBk4.coilseq.lupas_212015-04-17 16:46 1.8KCOILS output, window length 21
[ ]jp_5ZmKBk4.coilseq.lupas_282015-04-17 16:46 1.8KCOILS output, window length 28
[ ]jp_5ZmKBk4.concise2015-04-17 16:46 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_5ZmKBk4.concise.blc2015-04-17 16:46 11KBLC format prediction and alignment data
[ ]jp_5ZmKBk4.concise.fasta2015-04-17 16:46 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_5ZmKBk4.concise.pdf2015-04-17 16:46 59KPDF prediction and alignment data
[ ]jp_5ZmKBk4.concise.ps2015-04-17 16:46 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_5ZmKBk4.fasta2015-04-17 16:44 56 Input query sequence in FASTA format
[ ]jp_5ZmKBk4.full_MSA.fasta2015-04-17 16:46 20KFull MSA before JPred filters in FASTA
[TXT]jp_5ZmKBk4.full_MSA.fasta.noGaps.html2015-04-17 16:46 34KFull MSA before JPred filters in FASTA
[TXT]jp_5ZmKBk4.full_MSA.fasta.withGaps.html2015-04-17 16:46 80KFull MSA before JPred filters in FASTA
[ ]jp_5ZmKBk4.hmm2015-04-17 16:46 8.1KHHMer2 profile of the alignment
[TXT]jp_5ZmKBk4.html2015-04-17 16:46 48KHTML prediction and alignment data
[ ]jp_5ZmKBk4.input2015-04-17 16:17 50 Raw input data for analysis
[ ]jp_5ZmKBk4.jalview2015-04-17 16:46 1.7KJalview annotation file for alignment
[ ]jp_5ZmKBk4.jnet2015-04-17 16:46 1.7KJnet secondary structure output
[TXT]jp_5ZmKBk4.profile2015-04-17 16:45 7.3KPSIBLAST profile from alignment
[ ]jp_5ZmKBk4.pssm2015-04-17 16:46 9.2KPSIBLAST PSSM for Jnet
[TXT]jp_5ZmKBk4.results.html2016-02-15 12:19 28KJPred results page
[TXT]jp_5ZmKBk4.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5ZmKBk4.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5ZmKBk4.seq2015-04-17 16:17 56 Sequence data file
[TXT]jp_5ZmKBk4.simple.html2015-04-17 16:46 1.0KBrief HTML: sequence and prediction only
[TXT]jp_5ZmKBk4.svg.html2015-04-17 16:46 20KJalview SVG summary of results
[ ]jp_5ZmKBk4.tar.gz2015-04-17 16:46 113KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.