JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2e9xa1.name2015-04-17 16:51 0 Job name flag file
[ ]jp_NBXIOUA.align2015-04-17 17:50 44KPSIBLAST alignment in FASTA format
[TXT]jp_NBXIOUA.als2015-04-17 17:50 2.1KAlscript command file for PS/PDF output
[ ]jp_NBXIOUA.blast.gz2015-04-17 17:50 243KCompressed PSIBLAST output file
[TXT]jp_NBXIOUA.coils.csv2015-04-17 17:50 894 COILS output in CSV format
[ ]jp_NBXIOUA.coilseq.lupas_142015-04-17 17:50 6.0KCOILS output, window length 14
[ ]jp_NBXIOUA.coilseq.lupas_212015-04-17 17:50 6.0KCOILS output, window length 21
[ ]jp_NBXIOUA.coilseq.lupas_282015-04-17 17:50 6.0KCOILS output, window length 28
[ ]jp_NBXIOUA.concise2015-04-17 17:50 92KPrediction: coiled-coil, solvent, alignment
[ ]jp_NBXIOUA.concise.blc2015-04-17 17:50 46KBLC format prediction and alignment data
[ ]jp_NBXIOUA.concise.fasta2015-04-17 17:50 46KPrediction: coiled-coil, solvent, alignment
[ ]jp_NBXIOUA.concise.pdf2015-04-17 17:50 304KPDF prediction and alignment data
[ ]jp_NBXIOUA.concise.ps2015-04-17 17:50 5.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_NBXIOUA.fasta2015-04-17 17:44 159 Input query sequence in FASTA format
[ ]jp_NBXIOUA.full_MSA.fasta2015-04-17 17:50 439KFull MSA before JPred filters in FASTA
[TXT]jp_NBXIOUA.full_MSA.fasta.noGaps.html2015-04-17 17:50 108KFull MSA before JPred filters in FASTA
[TXT]jp_NBXIOUA.full_MSA.fasta.withGaps.html2015-04-17 17:50 1.2MFull MSA before JPred filters in FASTA
[ ]jp_NBXIOUA.hmm2015-04-17 17:50 27KHHMer2 profile of the alignment
[TXT]jp_NBXIOUA.html2015-04-17 17:50 115KHTML prediction and alignment data
[ ]jp_NBXIOUA.input2015-04-17 16:51 151 Raw input data for analysis
[ ]jp_NBXIOUA.jalview2015-04-17 17:50 3.8KJalview annotation file for alignment
[ ]jp_NBXIOUA.jnet2015-04-17 17:50 5.3KJnet secondary structure output
[TXT]jp_NBXIOUA.profile2015-04-17 17:47 23KPSIBLAST profile from alignment
[ ]jp_NBXIOUA.pssm2015-04-17 17:50 31KPSIBLAST PSSM for Jnet
[TXT]jp_NBXIOUA.results.html2016-02-15 12:19 66KJPred results page
[TXT]jp_NBXIOUA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_NBXIOUA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_NBXIOUA.seq2015-04-17 16:51 159 Sequence data file
[TXT]jp_NBXIOUA.simple.html2015-04-17 17:50 1.3KBrief HTML: sequence and prediction only
[TXT]jp_NBXIOUA.svg.html2015-04-17 17:51 58KJalview SVG summary of results
[ ]jp_NBXIOUA.tar.gz2015-04-17 17:51 773KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.