JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:29 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2ebsa1.name2015-04-17 15:38 0 Job name flag file
[ ]jp_1D2stjz.align2015-04-17 16:24 338KPSIBLAST alignment in FASTA format
[TXT]jp_1D2stjz.als2015-04-17 16:24 6.4KAlscript command file for PS/PDF output
[ ]jp_1D2stjz.blast.gz2015-04-17 16:13 39MCompressed PSIBLAST output file
[TXT]jp_1D2stjz.coils.csv2015-04-17 16:24 2.5KCOILS output in CSV format
[ ]jp_1D2stjz.coilseq.lupas_142015-04-17 16:24 18KCOILS output, window length 14
[ ]jp_1D2stjz.coilseq.lupas_212015-04-17 16:24 18KCOILS output, window length 21
[ ]jp_1D2stjz.coilseq.lupas_282015-04-17 16:24 18KCOILS output, window length 28
[ ]jp_1D2stjz.concise2015-04-17 16:24 678KPrediction: coiled-coil, solvent, alignment
[ ]jp_1D2stjz.concise.blc2015-04-17 16:24 340KBLC format prediction and alignment data
[ ]jp_1D2stjz.concise.fasta2015-04-17 16:24 342KPrediction: coiled-coil, solvent, alignment
[ ]jp_1D2stjz.concise.pdf2015-04-17 16:24 2.2MPDF prediction and alignment data
[ ]jp_1D2stjz.concise.ps2015-04-17 16:24 41MPrediction: coiled-coil, solvent, alignment
[ ]jp_1D2stjz.fasta2015-04-17 15:47 445 Input query sequence in FASTA format
[ ]jp_1D2stjz.full_MSA.fasta2015-04-17 16:20 138MFull MSA before JPred filters in FASTA
[TXT]jp_1D2stjz.full_MSA.fasta.noGaps.html2015-04-17 16:29 6.6MFull MSA before JPred filters in FASTA
[TXT]jp_1D2stjz.full_MSA.fasta.withGaps.html2015-04-17 16:29 260MFull MSA before JPred filters in FASTA
[ ]jp_1D2stjz.hmm2015-04-17 16:24 80KHHMer2 profile of the alignment
[TXT]jp_1D2stjz.html2015-04-17 16:24 517KHTML prediction and alignment data
[ ]jp_1D2stjz.input2015-04-17 15:38 434 Raw input data for analysis
[ ]jp_1D2stjz.jalview2015-04-17 16:24 9.2KJalview annotation file for alignment
[ ]jp_1D2stjz.jnet2015-04-17 16:24 16KJnet secondary structure output
[TXT]jp_1D2stjz.profile2015-04-17 16:08 68KPSIBLAST profile from alignment
[ ]jp_1D2stjz.pssm2015-04-17 16:24 92KPSIBLAST PSSM for Jnet
[TXT]jp_1D2stjz.results.html2016-02-15 12:19 176KJPred results page
[TXT]jp_1D2stjz.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_1D2stjz.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_1D2stjz.seq2015-04-17 15:38 445 Sequence data file
[TXT]jp_1D2stjz.simple.html2015-04-17 16:24 2.6KBrief HTML: sequence and prediction only
[TXT]jp_1D2stjz.svg.html2015-04-17 16:29 168KJalview SVG summary of results
[ ]jp_1D2stjz.tar.gz2015-04-17 16:29 63MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.