A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:48 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2f01a_.name | 2015-04-17 18:41 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_DpzIFIX.align | 2015-04-17 20:48 | 22K | PSIBLAST alignment in FASTA format |
| jp_DpzIFIX.als | 2015-04-17 20:48 | 2.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_DpzIFIX.blast.gz | 2015-04-17 20:48 | 73K | Compressed PSIBLAST output file |
| jp_DpzIFIX.coils.csv | 2015-04-17 20:48 | 756 | COILS output in CSV format |
| jp_DpzIFIX.coilseq.lupas_14 | 2015-04-17 20:48 | 5.1K | COILS output, window length 14 |
| jp_DpzIFIX.coilseq.lupas_21 | 2015-04-17 20:48 | 5.1K | COILS output, window length 21 |
| jp_DpzIFIX.coilseq.lupas_28 | 2015-04-17 20:48 | 5.1K | COILS output, window length 28 |
| jp_DpzIFIX.concise | 2015-04-17 20:48 | 46K | Prediction: coiled-coil, solvent, alignment |
| jp_DpzIFIX.concise.blc | 2015-04-17 20:48 | 23K | BLC format prediction and alignment data |
| jp_DpzIFIX.concise.fasta | 2015-04-17 20:48 | 23K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_DpzIFIX.concise.pdf | 2015-04-17 20:48 | 140K | PDF prediction and alignment data |
| jp_DpzIFIX.concise.ps | 2015-04-17 20:48 | 2.6M | Prediction: coiled-coil, solvent, alignment |
| jp_DpzIFIX.fasta | 2015-04-17 20:42 | 135 | Input query sequence in FASTA format |
| jp_DpzIFIX.full_MSA.fasta | 2015-04-17 20:48 | 104K | Full MSA before JPred filters in FASTA |
| jp_DpzIFIX.full_MSA.fasta.noGaps.html | 2015-04-17 20:48 | 60K | Full MSA before JPred filters in FASTA |
| jp_DpzIFIX.full_MSA.fasta.withGaps.html | 2015-04-17 20:48 | 541K | Full MSA before JPred filters in FASTA |
| jp_DpzIFIX.hmm | 2015-04-17 20:48 | 23K | HHMer2 profile of the alignment |
| jp_DpzIFIX.html | 2015-04-17 20:48 | 63K | HTML prediction and alignment data |
| jp_DpzIFIX.input | 2015-04-17 18:41 | 128 | Raw input data for analysis |
| jp_DpzIFIX.jalview | 2015-04-17 20:48 | 3.2K | Jalview annotation file for alignment |
| jp_DpzIFIX.jnet | 2015-04-17 20:48 | 4.5K | Jnet secondary structure output |
| jp_DpzIFIX.profile | 2015-04-17 20:47 | 20K | PSIBLAST profile from alignment |
| jp_DpzIFIX.pssm | 2015-04-17 20:48 | 26K | PSIBLAST PSSM for Jnet |
| jp_DpzIFIX.results.html | 2016-02-15 12:19 | 58K | JPred results page |
| jp_DpzIFIX.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_DpzIFIX.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_DpzIFIX.seq | 2015-04-17 18:41 | 135 | Sequence data file |
| jp_DpzIFIX.simple.html | 2015-04-17 20:48 | 1.4K | Brief HTML: sequence and prediction only |
![[TXT]](jp_DpzIFIX.svg.html) | jp_DpzIFIX.svg.html | 2015-04-17 20:48 | 50K | Jalview SVG summary of results |
| jp_DpzIFIX.tar.gz | 2015-04-17 20:48 | 336K | Archive containing complete results |
