JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2f2ba_.name2015-04-17 16:18 0 Job name flag file
[ ]jp_dwqcNPL.align2015-04-17 16:51 241KPSIBLAST alignment in FASTA format
[TXT]jp_dwqcNPL.als2015-04-17 16:51 3.0KAlscript command file for PS/PDF output
[ ]jp_dwqcNPL.blast.gz2015-04-17 16:48 4.5MCompressed PSIBLAST output file
[TXT]jp_dwqcNPL.coils.csv2015-04-17 16:51 1.5KCOILS output in CSV format
[ ]jp_dwqcNPL.coilseq.lupas_142015-04-17 16:51 10KCOILS output, window length 14
[ ]jp_dwqcNPL.coilseq.lupas_212015-04-17 16:51 10KCOILS output, window length 21
[ ]jp_dwqcNPL.coilseq.lupas_282015-04-17 16:51 10KCOILS output, window length 28
[ ]jp_dwqcNPL.concise2015-04-17 16:51 478KPrediction: coiled-coil, solvent, alignment
[ ]jp_dwqcNPL.concise.blc2015-04-17 16:51 241KBLC format prediction and alignment data
[ ]jp_dwqcNPL.concise.fasta2015-04-17 16:51 244KPrediction: coiled-coil, solvent, alignment
[ ]jp_dwqcNPL.concise.pdf2015-04-17 16:51 1.7MPDF prediction and alignment data
[ ]jp_dwqcNPL.concise.ps2015-04-17 16:51 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_dwqcNPL.fasta2015-04-17 16:45 261 Input query sequence in FASTA format
[ ]jp_dwqcNPL.full_MSA.fasta2015-04-17 16:50 7.3MFull MSA before JPred filters in FASTA
[TXT]jp_dwqcNPL.full_MSA.fasta.noGaps.html2015-04-17 16:51 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_dwqcNPL.full_MSA.fasta.withGaps.html2015-04-17 16:51 20MFull MSA before JPred filters in FASTA
[ ]jp_dwqcNPL.hmm2015-04-17 16:51 46KHHMer2 profile of the alignment
[TXT]jp_dwqcNPL.html2015-04-17 16:51 446KHTML prediction and alignment data
[ ]jp_dwqcNPL.input2015-04-17 16:18 252 Raw input data for analysis
[ ]jp_dwqcNPL.jalview2015-04-17 16:51 5.8KJalview annotation file for alignment
[ ]jp_dwqcNPL.jnet2015-04-17 16:51 9.0KJnet secondary structure output
[TXT]jp_dwqcNPL.profile2015-04-17 16:47 39KPSIBLAST profile from alignment
[ ]jp_dwqcNPL.pssm2015-04-17 16:51 53KPSIBLAST PSSM for Jnet
[TXT]jp_dwqcNPL.results.html2016-02-15 12:19 105KJPred results page
[TXT]jp_dwqcNPL.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_dwqcNPL.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_dwqcNPL.seq2015-04-17 16:18 261 Sequence data file
[TXT]jp_dwqcNPL.simple.html2015-04-17 16:51 1.6KBrief HTML: sequence and prediction only
[TXT]jp_dwqcNPL.svg.html2015-04-17 16:51 97KJalview SVG summary of results
[ ]jp_dwqcNPL.tar.gz2015-04-17 16:51 8.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.