JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:47 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2f2ha1.name2015-04-17 18:41 0 Job name flag file
[ ]jp_9nCF4RP.align2015-04-17 20:47 40KPSIBLAST alignment in FASTA format
[TXT]jp_9nCF4RP.als2015-04-17 20:47 2.5KAlscript command file for PS/PDF output
[ ]jp_9nCF4RP.blast.gz2015-04-17 20:46 95KCompressed PSIBLAST output file
[TXT]jp_9nCF4RP.coils.csv2015-04-17 20:47 678 COILS output in CSV format
[ ]jp_9nCF4RP.coilseq.lupas_142015-04-17 20:47 4.5KCOILS output, window length 14
[ ]jp_9nCF4RP.coilseq.lupas_212015-04-17 20:47 4.5KCOILS output, window length 21
[ ]jp_9nCF4RP.coilseq.lupas_282015-04-17 20:47 4.5KCOILS output, window length 28
[ ]jp_9nCF4RP.concise2015-04-17 20:47 80KPrediction: coiled-coil, solvent, alignment
[ ]jp_9nCF4RP.concise.blc2015-04-17 20:47 41KBLC format prediction and alignment data
[ ]jp_9nCF4RP.concise.fasta2015-04-17 20:47 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_9nCF4RP.concise.pdf2015-04-17 20:47 254KPDF prediction and alignment data
[ ]jp_9nCF4RP.concise.ps2015-04-17 20:47 4.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_9nCF4RP.fasta2015-04-17 20:42 122 Input query sequence in FASTA format
[ ]jp_9nCF4RP.full_MSA.fasta2015-04-17 20:46 98KFull MSA before JPred filters in FASTA
[TXT]jp_9nCF4RP.full_MSA.fasta.noGaps.html2015-04-17 20:47 87KFull MSA before JPred filters in FASTA
[TXT]jp_9nCF4RP.full_MSA.fasta.withGaps.html2015-04-17 20:47 701KFull MSA before JPred filters in FASTA
[ ]jp_9nCF4RP.hmm2015-04-17 20:47 20KHHMer2 profile of the alignment
[TXT]jp_9nCF4RP.html2015-04-17 20:47 112KHTML prediction and alignment data
[ ]jp_9nCF4RP.input2015-04-17 18:41 115 Raw input data for analysis
[ ]jp_9nCF4RP.jalview2015-04-17 20:47 3.0KJalview annotation file for alignment
[ ]jp_9nCF4RP.jnet2015-04-17 20:47 4.0KJnet secondary structure output
[TXT]jp_9nCF4RP.profile2015-04-17 20:45 18KPSIBLAST profile from alignment
[ ]jp_9nCF4RP.pssm2015-04-17 20:47 23KPSIBLAST PSSM for Jnet
[TXT]jp_9nCF4RP.results.html2016-02-15 12:19 52KJPred results page
[TXT]jp_9nCF4RP.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_9nCF4RP.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_9nCF4RP.seq2015-04-17 18:41 122 Sequence data file
[TXT]jp_9nCF4RP.simple.html2015-04-17 20:47 1.3KBrief HTML: sequence and prediction only
[TXT]jp_9nCF4RP.svg.html2015-04-17 20:47 44KJalview SVG summary of results
[ ]jp_9nCF4RP.tar.gz2015-04-17 20:47 517KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.