JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2f4ia1.name2015-04-17 19:20 0 Job name flag file
[ ]jp_cqQQawT.align2015-04-17 21:51 30KPSIBLAST alignment in FASTA format
[TXT]jp_cqQQawT.als2015-04-17 21:51 2.8KAlscript command file for PS/PDF output
[ ]jp_cqQQawT.blast.gz2015-04-17 21:51 53KCompressed PSIBLAST output file
[TXT]jp_cqQQawT.coils.csv2015-04-17 21:51 1.1KCOILS output in CSV format
[ ]jp_cqQQawT.coilseq.lupas_142015-04-17 21:51 7.4KCOILS output, window length 14
[ ]jp_cqQQawT.coilseq.lupas_212015-04-17 21:51 7.4KCOILS output, window length 21
[ ]jp_cqQQawT.coilseq.lupas_282015-04-17 21:51 7.4KCOILS output, window length 28
[ ]jp_cqQQawT.concise2015-04-17 21:51 64KPrediction: coiled-coil, solvent, alignment
[ ]jp_cqQQawT.concise.blc2015-04-17 21:51 32KBLC format prediction and alignment data
[ ]jp_cqQQawT.concise.fasta2015-04-17 21:51 31KPrediction: coiled-coil, solvent, alignment
[ ]jp_cqQQawT.concise.pdf2015-04-17 21:51 215KPDF prediction and alignment data
[ ]jp_cqQQawT.concise.ps2015-04-17 21:51 3.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_cqQQawT.fasta2015-04-17 21:48 191 Input query sequence in FASTA format
[ ]jp_cqQQawT.full_MSA.fasta2015-04-17 21:51 78KFull MSA before JPred filters in FASTA
[TXT]jp_cqQQawT.full_MSA.fasta.noGaps.html2015-04-17 21:51 65KFull MSA before JPred filters in FASTA
[TXT]jp_cqQQawT.full_MSA.fasta.withGaps.html2015-04-17 21:51 427KFull MSA before JPred filters in FASTA
[ ]jp_cqQQawT.hmm2015-04-17 21:51 33KHHMer2 profile of the alignment
[TXT]jp_cqQQawT.html2015-04-17 21:51 76KHTML prediction and alignment data
[ ]jp_cqQQawT.input2015-04-17 19:20 183 Raw input data for analysis
[ ]jp_cqQQawT.jalview2015-04-17 21:51 4.4KJalview annotation file for alignment
[ ]jp_cqQQawT.jnet2015-04-17 21:51 6.5KJnet secondary structure output
[TXT]jp_cqQQawT.profile2015-04-17 21:50 28KPSIBLAST profile from alignment
[ ]jp_cqQQawT.pssm2015-04-17 21:51 38KPSIBLAST PSSM for Jnet
[TXT]jp_cqQQawT.results.html2016-02-15 12:19 79KJPred results page
[TXT]jp_cqQQawT.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_cqQQawT.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_cqQQawT.seq2015-04-17 19:20 191 Sequence data file
[TXT]jp_cqQQawT.simple.html2015-04-17 21:51 1.5KBrief HTML: sequence and prediction only
[TXT]jp_cqQQawT.svg.html2015-04-17 21:51 71KJalview SVG summary of results
[ ]jp_cqQQawT.tar.gz2015-04-17 21:51 403KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.