JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:55 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2f6ma_.name2015-04-17 17:39 0 Job name flag file
[ ]jp_6jfA2iK.align2015-04-17 20:55 14KPSIBLAST alignment in FASTA format
[TXT]jp_6jfA2iK.als2015-04-17 20:55 1.4KAlscript command file for PS/PDF output
[ ]jp_6jfA2iK.blast.gz2015-04-17 20:55 58KCompressed PSIBLAST output file
[TXT]jp_6jfA2iK.coils.csv2015-04-17 20:55 420 COILS output in CSV format
[ ]jp_6jfA2iK.coilseq.lupas_142015-04-17 20:55 2.7KCOILS output, window length 14
[ ]jp_6jfA2iK.coilseq.lupas_212015-04-17 20:55 2.7KCOILS output, window length 21
[ ]jp_6jfA2iK.coilseq.lupas_282015-04-17 20:55 2.7KCOILS output, window length 28
[ ]jp_6jfA2iK.concise2015-04-17 20:55 29KPrediction: coiled-coil, solvent, alignment
[ ]jp_6jfA2iK.concise.blc2015-04-17 20:55 15KBLC format prediction and alignment data
[ ]jp_6jfA2iK.concise.fasta2015-04-17 20:55 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_6jfA2iK.concise.pdf2015-04-17 20:55 94KPDF prediction and alignment data
[ ]jp_6jfA2iK.concise.ps2015-04-17 20:55 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_6jfA2iK.fasta2015-04-17 19:00 78 Input query sequence in FASTA format
[ ]jp_6jfA2iK.full_MSA.fasta2015-04-17 20:55 54KFull MSA before JPred filters in FASTA
[TXT]jp_6jfA2iK.full_MSA.fasta.noGaps.html2015-04-17 20:55 78KFull MSA before JPred filters in FASTA
[TXT]jp_6jfA2iK.full_MSA.fasta.withGaps.html2015-04-17 20:55 256KFull MSA before JPred filters in FASTA
[ ]jp_6jfA2iK.hmm2015-04-17 20:55 12KHHMer2 profile of the alignment
[TXT]jp_6jfA2iK.html2015-04-17 20:55 58KHTML prediction and alignment data
[ ]jp_6jfA2iK.input2015-04-17 17:39 72 Raw input data for analysis
[ ]jp_6jfA2iK.jalview2015-04-17 20:55 2.2KJalview annotation file for alignment
[ ]jp_6jfA2iK.jnet2015-04-17 20:55 2.5KJnet secondary structure output
[TXT]jp_6jfA2iK.profile2015-04-17 20:49 11KPSIBLAST profile from alignment
[ ]jp_6jfA2iK.pssm2015-04-17 20:55 14KPSIBLAST PSSM for Jnet
[TXT]jp_6jfA2iK.results.html2016-02-15 12:19 35KJPred results page
[TXT]jp_6jfA2iK.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_6jfA2iK.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_6jfA2iK.seq2015-04-17 17:39 78 Sequence data file
[TXT]jp_6jfA2iK.simple.html2015-04-17 20:55 1.0KBrief HTML: sequence and prediction only
[TXT]jp_6jfA2iK.svg.html2015-04-17 20:55 27KJalview SVG summary of results
[ ]jp_6jfA2iK.tar.gz2015-04-17 20:55 229KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.