JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:55 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fcja1.name2015-04-17 19:20 0 Job name flag file
[ ]jp_xMvYUNW.align2015-04-17 21:55 78KPSIBLAST alignment in FASTA format
[TXT]jp_xMvYUNW.als2015-04-17 21:55 2.5KAlscript command file for PS/PDF output
[ ]jp_xMvYUNW.blast.gz2015-04-17 21:54 238KCompressed PSIBLAST output file
[TXT]jp_xMvYUNW.coils.csv2015-04-17 21:55 714 COILS output in CSV format
[ ]jp_xMvYUNW.coilseq.lupas_142015-04-17 21:55 4.8KCOILS output, window length 14
[ ]jp_xMvYUNW.coilseq.lupas_212015-04-17 21:55 4.8KCOILS output, window length 21
[ ]jp_xMvYUNW.coilseq.lupas_282015-04-17 21:55 4.8KCOILS output, window length 28
[ ]jp_xMvYUNW.concise2015-04-17 21:55 153KPrediction: coiled-coil, solvent, alignment
[ ]jp_xMvYUNW.concise.blc2015-04-17 21:55 79KBLC format prediction and alignment data
[ ]jp_xMvYUNW.concise.fasta2015-04-17 21:55 79KPrediction: coiled-coil, solvent, alignment
[ ]jp_xMvYUNW.concise.pdf2015-04-17 21:55 490KPDF prediction and alignment data
[ ]jp_xMvYUNW.concise.ps2015-04-17 21:55 8.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_xMvYUNW.fasta2015-04-17 21:48 128 Input query sequence in FASTA format
[ ]jp_xMvYUNW.full_MSA.fasta2015-04-17 21:54 419KFull MSA before JPred filters in FASTA
[TXT]jp_xMvYUNW.full_MSA.fasta.noGaps.html2015-04-17 21:55 241KFull MSA before JPred filters in FASTA
[TXT]jp_xMvYUNW.full_MSA.fasta.withGaps.html2015-04-17 21:55 2.0MFull MSA before JPred filters in FASTA
[ ]jp_xMvYUNW.hmm2015-04-17 21:55 21KHHMer2 profile of the alignment
[TXT]jp_xMvYUNW.html2015-04-17 21:55 204KHTML prediction and alignment data
[ ]jp_xMvYUNW.input2015-04-17 19:20 121 Raw input data for analysis
[ ]jp_xMvYUNW.jalview2015-04-17 21:55 3.1KJalview annotation file for alignment
[ ]jp_xMvYUNW.jnet2015-04-17 21:55 4.2KJnet secondary structure output
[TXT]jp_xMvYUNW.profile2015-04-17 21:53 19KPSIBLAST profile from alignment
[ ]jp_xMvYUNW.pssm2015-04-17 21:55 24KPSIBLAST PSSM for Jnet
[TXT]jp_xMvYUNW.results.html2016-02-15 12:19 56KJPred results page
[TXT]jp_xMvYUNW.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_xMvYUNW.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_xMvYUNW.seq2015-04-17 19:20 128 Sequence data file
[TXT]jp_xMvYUNW.simple.html2015-04-17 21:55 1.3KBrief HTML: sequence and prediction only
[TXT]jp_xMvYUNW.svg.html2015-04-17 21:55 48KJalview SVG summary of results
[ ]jp_xMvYUNW.tar.gz2015-04-17 21:55 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.