JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fefa2.name2015-04-17 17:28 0 Job name flag file
[ ]jp_kxK6vnk.align2015-04-17 18:44 34KPSIBLAST alignment in FASTA format
[TXT]jp_kxK6vnk.als2015-04-17 18:44 2.6KAlscript command file for PS/PDF output
[ ]jp_kxK6vnk.blast.gz2015-04-17 18:44 106KCompressed PSIBLAST output file
[TXT]jp_kxK6vnk.coils.csv2015-04-17 18:44 966 COILS output in CSV format
[ ]jp_kxK6vnk.coilseq.lupas_142015-04-17 18:44 6.6KCOILS output, window length 14
[ ]jp_kxK6vnk.coilseq.lupas_212015-04-17 18:44 6.6KCOILS output, window length 21
[ ]jp_kxK6vnk.coilseq.lupas_282015-04-17 18:44 6.6KCOILS output, window length 28
[ ]jp_kxK6vnk.concise2015-04-17 18:44 71KPrediction: coiled-coil, solvent, alignment
[ ]jp_kxK6vnk.concise.blc2015-04-17 18:44 35KBLC format prediction and alignment data
[ ]jp_kxK6vnk.concise.fasta2015-04-17 18:44 35KPrediction: coiled-coil, solvent, alignment
[ ]jp_kxK6vnk.concise.pdf2015-04-17 18:44 237KPDF prediction and alignment data
[ ]jp_kxK6vnk.concise.ps2015-04-17 18:44 4.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_kxK6vnk.fasta2015-04-17 18:41 171 Input query sequence in FASTA format
[ ]jp_kxK6vnk.full_MSA.fasta2015-04-17 18:44 186KFull MSA before JPred filters in FASTA
[TXT]jp_kxK6vnk.full_MSA.fasta.noGaps.html2015-04-17 18:44 91KFull MSA before JPred filters in FASTA
[TXT]jp_kxK6vnk.full_MSA.fasta.withGaps.html2015-04-17 18:44 955KFull MSA before JPred filters in FASTA
[ ]jp_kxK6vnk.hmm2015-04-17 18:44 29KHHMer2 profile of the alignment
[TXT]jp_kxK6vnk.html2015-04-17 18:44 87KHTML prediction and alignment data
[ ]jp_kxK6vnk.input2015-04-17 17:28 163 Raw input data for analysis
[ ]jp_kxK6vnk.jalview2015-04-17 18:44 3.9KJalview annotation file for alignment
[ ]jp_kxK6vnk.jnet2015-04-17 18:44 5.7KJnet secondary structure output
[TXT]jp_kxK6vnk.profile2015-04-17 18:43 25KPSIBLAST profile from alignment
[ ]jp_kxK6vnk.pssm2015-04-17 18:44 34KPSIBLAST PSSM for Jnet
[TXT]jp_kxK6vnk.results.html2016-02-15 12:19 72KJPred results page
[TXT]jp_kxK6vnk.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_kxK6vnk.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_kxK6vnk.seq2015-04-17 17:28 171 Sequence data file
[TXT]jp_kxK6vnk.simple.html2015-04-17 18:44 1.4KBrief HTML: sequence and prediction only
[TXT]jp_kxK6vnk.svg.html2015-04-17 18:44 64KJalview SVG summary of results
[ ]jp_kxK6vnk.tar.gz2015-04-17 18:44 541KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.