JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:50 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fg1a_.name2015-04-17 17:29 0 Job name flag file
[ ]jp_Iqu5t5n.align2015-04-17 18:50 193KPSIBLAST alignment in FASTA format
[TXT]jp_Iqu5t5n.als2015-04-17 18:50 2.8KAlscript command file for PS/PDF output
[ ]jp_Iqu5t5n.blast.gz2015-04-17 18:49 905KCompressed PSIBLAST output file
[TXT]jp_Iqu5t5n.coils.csv2015-04-17 18:50 972 COILS output in CSV format
[ ]jp_Iqu5t5n.coilseq.lupas_142015-04-17 18:50 6.6KCOILS output, window length 14
[ ]jp_Iqu5t5n.coilseq.lupas_212015-04-17 18:50 6.6KCOILS output, window length 21
[ ]jp_Iqu5t5n.coilseq.lupas_282015-04-17 18:50 6.6KCOILS output, window length 28
[ ]jp_Iqu5t5n.concise2015-04-17 18:50 376KPrediction: coiled-coil, solvent, alignment
[ ]jp_Iqu5t5n.concise.blc2015-04-17 18:50 192KBLC format prediction and alignment data
[ ]jp_Iqu5t5n.concise.fasta2015-04-17 18:50 195KPrediction: coiled-coil, solvent, alignment
[ ]jp_Iqu5t5n.concise.pdf2015-04-17 18:50 1.3MPDF prediction and alignment data
[ ]jp_Iqu5t5n.concise.ps2015-04-17 18:50 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_Iqu5t5n.fasta2015-04-17 18:42 172 Input query sequence in FASTA format
[ ]jp_Iqu5t5n.full_MSA.fasta2015-04-17 18:49 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_Iqu5t5n.full_MSA.fasta.noGaps.html2015-04-17 18:50 436KFull MSA before JPred filters in FASTA
[TXT]jp_Iqu5t5n.full_MSA.fasta.withGaps.html2015-04-17 18:50 7.5MFull MSA before JPred filters in FASTA
[ ]jp_Iqu5t5n.hmm2015-04-17 18:50 29KHHMer2 profile of the alignment
[TXT]jp_Iqu5t5n.html2015-04-17 18:50 422KHTML prediction and alignment data
[ ]jp_Iqu5t5n.input2015-04-17 17:29 164 Raw input data for analysis
[ ]jp_Iqu5t5n.jalview2015-04-17 18:50 4.0KJalview annotation file for alignment
[ ]jp_Iqu5t5n.jnet2015-04-17 18:50 5.8KJnet secondary structure output
[TXT]jp_Iqu5t5n.profile2015-04-17 18:47 25KPSIBLAST profile from alignment
[ ]jp_Iqu5t5n.pssm2015-04-17 18:50 34KPSIBLAST PSSM for Jnet
[TXT]jp_Iqu5t5n.results.html2016-02-15 12:19 72KJPred results page
[TXT]jp_Iqu5t5n.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Iqu5t5n.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Iqu5t5n.seq2015-04-17 17:29 172 Sequence data file
[TXT]jp_Iqu5t5n.simple.html2015-04-17 18:50 1.4KBrief HTML: sequence and prediction only
[TXT]jp_Iqu5t5n.svg.html2015-04-17 18:50 64KJalview SVG summary of results
[ ]jp_Iqu5t5n.tar.gz2015-04-17 18:50 3.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.