A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:47 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2fi0a1.name | 2015-04-17 18:42 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_tWxr0SE.align | 2015-04-17 20:47 | 37K | PSIBLAST alignment in FASTA format |
| jp_tWxr0SE.als | 2015-04-17 20:47 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_tWxr0SE.blast.gz | 2015-04-17 20:47 | 76K | Compressed PSIBLAST output file |
| jp_tWxr0SE.coils.csv | 2015-04-17 20:47 | 504 | COILS output in CSV format |
| jp_tWxr0SE.coilseq.lupas_14 | 2015-04-17 20:47 | 3.3K | COILS output, window length 14 |
| jp_tWxr0SE.coilseq.lupas_21 | 2015-04-17 20:47 | 3.3K | COILS output, window length 21 |
| jp_tWxr0SE.coilseq.lupas_28 | 2015-04-17 20:47 | 3.3K | COILS output, window length 28 |
| jp_tWxr0SE.concise | 2015-04-17 20:47 | 73K | Prediction: coiled-coil, solvent, alignment |
| jp_tWxr0SE.concise.blc | 2015-04-17 20:47 | 38K | BLC format prediction and alignment data |
| jp_tWxr0SE.concise.fasta | 2015-04-17 20:47 | 38K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_tWxr0SE.concise.pdf | 2015-04-17 20:47 | 238K | PDF prediction and alignment data |
| jp_tWxr0SE.concise.ps | 2015-04-17 20:47 | 4.1M | Prediction: coiled-coil, solvent, alignment |
| jp_tWxr0SE.fasta | 2015-04-17 20:43 | 93 | Input query sequence in FASTA format |
| jp_tWxr0SE.full_MSA.fasta | 2015-04-17 20:47 | 80K | Full MSA before JPred filters in FASTA |
| jp_tWxr0SE.full_MSA.fasta.noGaps.html | 2015-04-17 20:47 | 115K | Full MSA before JPred filters in FASTA |
| jp_tWxr0SE.full_MSA.fasta.withGaps.html | 2015-04-17 20:47 | 437K | Full MSA before JPred filters in FASTA |
| jp_tWxr0SE.hmm | 2015-04-17 20:47 | 15K | HHMer2 profile of the alignment |
| jp_tWxr0SE.html | 2015-04-17 20:47 | 121K | HTML prediction and alignment data |
| jp_tWxr0SE.input | 2015-04-17 18:42 | 86 | Raw input data for analysis |
| jp_tWxr0SE.jalview | 2015-04-17 20:47 | 2.4K | Jalview annotation file for alignment |
| jp_tWxr0SE.jnet | 2015-04-17 20:47 | 3.0K | Jnet secondary structure output |
| jp_tWxr0SE.profile | 2015-04-17 20:45 | 13K | PSIBLAST profile from alignment |
| jp_tWxr0SE.pssm | 2015-04-17 20:47 | 17K | PSIBLAST PSSM for Jnet |
| jp_tWxr0SE.results.html | 2016-02-15 12:19 | 43K | JPred results page |
| jp_tWxr0SE.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_tWxr0SE.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_tWxr0SE.seq | 2015-04-17 18:42 | 93 | Sequence data file |
| jp_tWxr0SE.simple.html | 2015-04-17 20:47 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_tWxr0SE.svg.html) | jp_tWxr0SE.svg.html | 2015-04-17 20:47 | 35K | Jalview SVG summary of results |
| jp_tWxr0SE.tar.gz | 2015-04-17 20:47 | 456K | Archive containing complete results |
