JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:52 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fiya1.name2015-04-17 18:06 0 Job name flag file
[ ]jp__HjQKb8.align2015-04-17 19:52 114KPSIBLAST alignment in FASTA format
[TXT]jp__HjQKb8.als2015-04-17 19:52 3.6KAlscript command file for PS/PDF output
[ ]jp__HjQKb8.blast.gz2015-04-17 19:51 590KCompressed PSIBLAST output file
[TXT]jp__HjQKb8.coils.csv2015-04-17 19:52 1.7KCOILS output in CSV format
[ ]jp__HjQKb8.coilseq.lupas_142015-04-17 19:52 12KCOILS output, window length 14
[ ]jp__HjQKb8.coilseq.lupas_212015-04-17 19:52 12KCOILS output, window length 21
[ ]jp__HjQKb8.coilseq.lupas_282015-04-17 19:52 12KCOILS output, window length 28
[ ]jp__HjQKb8.concise2015-04-17 19:52 233KPrediction: coiled-coil, solvent, alignment
[ ]jp__HjQKb8.concise.blc2015-04-17 19:52 116KBLC format prediction and alignment data
[ ]jp__HjQKb8.concise.fasta2015-04-17 19:52 117KPrediction: coiled-coil, solvent, alignment
[ ]jp__HjQKb8.concise.pdf2015-04-17 19:52 843KPDF prediction and alignment data
[ ]jp__HjQKb8.concise.ps2015-04-17 19:52 14MPrediction: coiled-coil, solvent, alignment
[ ]jp__HjQKb8.fasta2015-04-17 19:46 301 Input query sequence in FASTA format
[ ]jp__HjQKb8.full_MSA.fasta2015-04-17 19:51 861KFull MSA before JPred filters in FASTA
[TXT]jp__HjQKb8.full_MSA.fasta.noGaps.html2015-04-17 19:52 229KFull MSA before JPred filters in FASTA
[TXT]jp__HjQKb8.full_MSA.fasta.withGaps.html2015-04-17 19:52 3.8MFull MSA before JPred filters in FASTA
[ ]jp__HjQKb8.hmm2015-04-17 19:52 53KHHMer2 profile of the alignment
[TXT]jp__HjQKb8.html2015-04-17 19:52 214KHTML prediction and alignment data
[ ]jp__HjQKb8.input2015-04-17 18:06 292 Raw input data for analysis
[ ]jp__HjQKb8.jalview2015-04-17 19:52 6.6KJalview annotation file for alignment
[ ]jp__HjQKb8.jnet2015-04-17 19:52 10KJnet secondary structure output
[TXT]jp__HjQKb8.profile2015-04-17 19:49 46KPSIBLAST profile from alignment
[ ]jp__HjQKb8.pssm2015-04-17 19:52 61KPSIBLAST PSSM for Jnet
[TXT]jp__HjQKb8.results.html2016-02-15 12:19 120KJPred results page
[TXT]jp__HjQKb8.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp__HjQKb8.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp__HjQKb8.seq2015-04-17 18:06 301 Sequence data file
[TXT]jp__HjQKb8.simple.html2015-04-17 19:52 1.8KBrief HTML: sequence and prediction only
[TXT]jp__HjQKb8.svg.html2015-04-17 19:52 112KJalview SVG summary of results
[ ]jp__HjQKb8.tar.gz2015-04-17 19:52 2.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.