JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:48 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fpna1.name2015-04-17 18:42 0 Job name flag file
[ ]jp_kZIDjo_.align2015-04-17 20:47 40KPSIBLAST alignment in FASTA format
[TXT]jp_kZIDjo_.als2015-04-17 20:47 3.4KAlscript command file for PS/PDF output
[ ]jp_kZIDjo_.blast.gz2015-04-17 20:47 115KCompressed PSIBLAST output file
[TXT]jp_kZIDjo_.coils.csv2015-04-17 20:47 1.2KCOILS output in CSV format
[ ]jp_kZIDjo_.coilseq.lupas_142015-04-17 20:47 8.6KCOILS output, window length 14
[ ]jp_kZIDjo_.coilseq.lupas_212015-04-17 20:47 8.6KCOILS output, window length 21
[ ]jp_kZIDjo_.coilseq.lupas_282015-04-17 20:47 8.6KCOILS output, window length 28
[ ]jp_kZIDjo_.concise2015-04-17 20:47 86KPrediction: coiled-coil, solvent, alignment
[ ]jp_kZIDjo_.concise.blc2015-04-17 20:47 43KBLC format prediction and alignment data
[ ]jp_kZIDjo_.concise.fasta2015-04-17 20:47 42KPrediction: coiled-coil, solvent, alignment
[ ]jp_kZIDjo_.concise.pdf2015-04-17 20:48 297KPDF prediction and alignment data
[ ]jp_kZIDjo_.concise.ps2015-04-17 20:47 5.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_kZIDjo_.fasta2015-04-17 20:44 220 Input query sequence in FASTA format
[ ]jp_kZIDjo_.full_MSA.fasta2015-04-17 20:47 175KFull MSA before JPred filters in FASTA
[TXT]jp_kZIDjo_.full_MSA.fasta.noGaps.html2015-04-17 20:48 72KFull MSA before JPred filters in FASTA
[TXT]jp_kZIDjo_.full_MSA.fasta.withGaps.html2015-04-17 20:48 946KFull MSA before JPred filters in FASTA
[ ]jp_kZIDjo_.hmm2015-04-17 20:47 38KHHMer2 profile of the alignment
[TXT]jp_kZIDjo_.html2015-04-17 20:47 97KHTML prediction and alignment data
[ ]jp_kZIDjo_.input2015-04-17 18:42 212 Raw input data for analysis
[ ]jp_kZIDjo_.jalview2015-04-17 20:47 5.0KJalview annotation file for alignment
[ ]jp_kZIDjo_.jnet2015-04-17 20:47 7.5KJnet secondary structure output
[TXT]jp_kZIDjo_.profile2015-04-17 20:47 33KPSIBLAST profile from alignment
[ ]jp_kZIDjo_.pssm2015-04-17 20:47 44KPSIBLAST PSSM for Jnet
[TXT]jp_kZIDjo_.results.html2016-02-15 12:19 91KJPred results page
[TXT]jp_kZIDjo_.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_kZIDjo_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_kZIDjo_.seq2015-04-17 18:42 220 Sequence data file
[TXT]jp_kZIDjo_.simple.html2015-04-17 20:47 1.6KBrief HTML: sequence and prediction only
[TXT]jp_kZIDjo_.svg.html2015-04-17 20:48 83KJalview SVG summary of results
[ ]jp_kZIDjo_.tar.gz2015-04-17 20:48 625KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.