JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:48 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fupa1.name2015-04-17 18:42 0 Job name flag file
[ ]jp_awWiXRq.align2015-04-17 20:47 56KPSIBLAST alignment in FASTA format
[TXT]jp_awWiXRq.als2015-04-17 20:47 1.8KAlscript command file for PS/PDF output
[ ]jp_awWiXRq.blast.gz2015-04-17 20:47 106KCompressed PSIBLAST output file
[TXT]jp_awWiXRq.coils.csv2015-04-17 20:47 798 COILS output in CSV format
[ ]jp_awWiXRq.coilseq.lupas_142015-04-17 20:47 5.4KCOILS output, window length 14
[ ]jp_awWiXRq.coilseq.lupas_212015-04-17 20:47 5.4KCOILS output, window length 21
[ ]jp_awWiXRq.coilseq.lupas_282015-04-17 20:47 5.4KCOILS output, window length 28
[ ]jp_awWiXRq.concise2015-04-17 20:47 112KPrediction: coiled-coil, solvent, alignment
[ ]jp_awWiXRq.concise.blc2015-04-17 20:47 57KBLC format prediction and alignment data
[ ]jp_awWiXRq.concise.fasta2015-04-17 20:47 57KPrediction: coiled-coil, solvent, alignment
[ ]jp_awWiXRq.concise.pdf2015-04-17 20:47 390KPDF prediction and alignment data
[ ]jp_awWiXRq.concise.ps2015-04-17 20:47 6.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_awWiXRq.fasta2015-04-17 20:44 142 Input query sequence in FASTA format
[ ]jp_awWiXRq.full_MSA.fasta2015-04-17 20:47 169KFull MSA before JPred filters in FASTA
[TXT]jp_awWiXRq.full_MSA.fasta.noGaps.html2015-04-17 20:47 122KFull MSA before JPred filters in FASTA
[TXT]jp_awWiXRq.full_MSA.fasta.withGaps.html2015-04-17 20:47 937KFull MSA before JPred filters in FASTA
[ ]jp_awWiXRq.hmm2015-04-17 20:47 24KHHMer2 profile of the alignment
[TXT]jp_awWiXRq.html2015-04-17 20:47 146KHTML prediction and alignment data
[ ]jp_awWiXRq.input2015-04-17 18:42 135 Raw input data for analysis
[ ]jp_awWiXRq.jalview2015-04-17 20:47 3.5KJalview annotation file for alignment
[ ]jp_awWiXRq.jnet2015-04-17 20:47 4.7KJnet secondary structure output
[TXT]jp_awWiXRq.profile2015-04-17 20:46 21KPSIBLAST profile from alignment
[ ]jp_awWiXRq.pssm2015-04-17 20:47 28KPSIBLAST PSSM for Jnet
[TXT]jp_awWiXRq.results.html2016-02-15 12:19 58KJPred results page
[TXT]jp_awWiXRq.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_awWiXRq.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_awWiXRq.seq2015-04-17 18:42 142 Sequence data file
[TXT]jp_awWiXRq.simple.html2015-04-17 20:47 1.2KBrief HTML: sequence and prediction only
[TXT]jp_awWiXRq.svg.html2015-04-17 20:47 50KJalview SVG summary of results
[ ]jp_awWiXRq.tar.gz2015-04-17 20:48 742KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.