JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:10 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fvya_.name2015-04-17 17:30 0 Job name flag file
[ ]jp_7EPDhbD.align2015-04-17 19:09 300KPSIBLAST alignment in FASTA format
[TXT]jp_7EPDhbD.als2015-04-17 19:09 4.5KAlscript command file for PS/PDF output
[ ]jp_7EPDhbD.blast.gz2015-04-17 19:06 14MCompressed PSIBLAST output file
[TXT]jp_7EPDhbD.coils.csv2015-04-17 19:09 1.8KCOILS output in CSV format
[ ]jp_7EPDhbD.coilseq.lupas_142015-04-17 19:09 13KCOILS output, window length 14
[ ]jp_7EPDhbD.coilseq.lupas_212015-04-17 19:09 13KCOILS output, window length 21
[ ]jp_7EPDhbD.coilseq.lupas_282015-04-17 19:09 13KCOILS output, window length 28
[ ]jp_7EPDhbD.concise2015-04-17 19:09 594KPrediction: coiled-coil, solvent, alignment
[ ]jp_7EPDhbD.concise.blc2015-04-17 19:09 300KBLC format prediction and alignment data
[ ]jp_7EPDhbD.concise.fasta2015-04-17 19:09 303KPrediction: coiled-coil, solvent, alignment
[ ]jp_7EPDhbD.concise.pdf2015-04-17 19:09 2.2MPDF prediction and alignment data
[ ]jp_7EPDhbD.concise.ps2015-04-17 19:09 38MPrediction: coiled-coil, solvent, alignment
[ ]jp_7EPDhbD.fasta2015-04-17 18:43 322 Input query sequence in FASTA format
[ ]jp_7EPDhbD.full_MSA.fasta2015-04-17 19:08 21MFull MSA before JPred filters in FASTA
[TXT]jp_7EPDhbD.full_MSA.fasta.noGaps.html2015-04-17 19:10 4.2MFull MSA before JPred filters in FASTA
[TXT]jp_7EPDhbD.full_MSA.fasta.withGaps.html2015-04-17 19:10 89MFull MSA before JPred filters in FASTA
[ ]jp_7EPDhbD.hmm2015-04-17 19:09 57KHHMer2 profile of the alignment
[TXT]jp_7EPDhbD.html2015-04-17 19:09 506KHTML prediction and alignment data
[ ]jp_7EPDhbD.input2015-04-17 17:30 312 Raw input data for analysis
[ ]jp_7EPDhbD.jalview2015-04-17 19:09 7.0KJalview annotation file for alignment
[ ]jp_7EPDhbD.jnet2015-04-17 19:09 11KJnet secondary structure output
[TXT]jp_7EPDhbD.profile2015-04-17 19:03 49KPSIBLAST profile from alignment
[ ]jp_7EPDhbD.pssm2015-04-17 19:09 66KPSIBLAST PSSM for Jnet
[TXT]jp_7EPDhbD.results.html2016-02-15 12:19 131KJPred results page
[TXT]jp_7EPDhbD.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7EPDhbD.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_7EPDhbD.seq2015-04-17 17:30 322 Sequence data file
[TXT]jp_7EPDhbD.simple.html2015-04-17 19:09 2.0KBrief HTML: sequence and prediction only
[TXT]jp_7EPDhbD.svg.html2015-04-17 19:10 123KJalview SVG summary of results
[ ]jp_7EPDhbD.tar.gz2015-04-17 19:10 27MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.