JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:50 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fzpa1.name2015-04-17 16:52 0 Job name flag file
[ ]jp_Ha0hM2B.align2015-04-17 17:49 4.5KPSIBLAST alignment in FASTA format
[TXT]jp_Ha0hM2B.als2015-04-17 17:49 2.1KAlscript command file for PS/PDF output
[ ]jp_Ha0hM2B.blast.gz2015-04-17 17:49 8.8KCompressed PSIBLAST output file
[TXT]jp_Ha0hM2B.coils.csv2015-04-17 17:49 780 COILS output in CSV format
[ ]jp_Ha0hM2B.coilseq.lupas_142015-04-17 17:49 5.2KCOILS output, window length 14
[ ]jp_Ha0hM2B.coilseq.lupas_212015-04-17 17:49 5.2KCOILS output, window length 21
[ ]jp_Ha0hM2B.coilseq.lupas_282015-04-17 17:49 5.2KCOILS output, window length 28
[ ]jp_Ha0hM2B.concise2015-04-17 17:49 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ha0hM2B.concise.blc2015-04-17 17:49 6.4KBLC format prediction and alignment data
[ ]jp_Ha0hM2B.concise.fasta2015-04-17 17:49 5.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ha0hM2B.concise.pdf2015-04-17 17:50 42KPDF prediction and alignment data
[ ]jp_Ha0hM2B.concise.ps2015-04-17 17:50 743KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ha0hM2B.fasta2015-04-17 17:45 139 Input query sequence in FASTA format
[ ]jp_Ha0hM2B.full_MSA.fasta2015-04-17 17:49 11KFull MSA before JPred filters in FASTA
[TXT]jp_Ha0hM2B.full_MSA.fasta.noGaps.html2015-04-17 17:50 16KFull MSA before JPred filters in FASTA
[TXT]jp_Ha0hM2B.full_MSA.fasta.withGaps.html2015-04-17 17:50 29KFull MSA before JPred filters in FASTA
[ ]jp_Ha0hM2B.hmm2015-04-17 17:49 23KHHMer2 profile of the alignment
[TXT]jp_Ha0hM2B.html2015-04-17 17:49 23KHTML prediction and alignment data
[ ]jp_Ha0hM2B.input2015-04-17 16:52 132 Raw input data for analysis
[ ]jp_Ha0hM2B.jalview2015-04-17 17:49 3.3KJalview annotation file for alignment
[ ]jp_Ha0hM2B.jnet2015-04-17 17:49 4.6KJnet secondary structure output
[TXT]jp_Ha0hM2B.profile2015-04-17 17:47 20KPSIBLAST profile from alignment
[ ]jp_Ha0hM2B.pssm2015-04-17 17:49 27KPSIBLAST PSSM for Jnet
[TXT]jp_Ha0hM2B.results.html2016-02-15 12:19 59KJPred results page
[TXT]jp_Ha0hM2B.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Ha0hM2B.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Ha0hM2B.seq2015-04-17 16:52 139 Sequence data file
[TXT]jp_Ha0hM2B.simple.html2015-04-17 17:49 1.2KBrief HTML: sequence and prediction only
[TXT]jp_Ha0hM2B.svg.html2015-04-17 17:50 51KJalview SVG summary of results
[ ]jp_Ha0hM2B.tar.gz2015-04-17 17:50 94KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.