JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:49 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2g03a1.name2015-04-17 17:30 0 Job name flag file
[ ]jp_83rHKfc.align2015-04-17 18:49 198KPSIBLAST alignment in FASTA format
[TXT]jp_83rHKfc.als2015-04-17 18:49 2.8KAlscript command file for PS/PDF output
[ ]jp_83rHKfc.blast.gz2015-04-17 18:48 2.6MCompressed PSIBLAST output file
[TXT]jp_83rHKfc.coils.csv2015-04-17 18:49 1.1KCOILS output in CSV format
[ ]jp_83rHKfc.coilseq.lupas_142015-04-17 18:49 7.4KCOILS output, window length 14
[ ]jp_83rHKfc.coilseq.lupas_212015-04-17 18:49 7.4KCOILS output, window length 21
[ ]jp_83rHKfc.coilseq.lupas_282015-04-17 18:49 7.4KCOILS output, window length 28
[ ]jp_83rHKfc.concise2015-04-17 18:49 387KPrediction: coiled-coil, solvent, alignment
[ ]jp_83rHKfc.concise.blc2015-04-17 18:49 197KBLC format prediction and alignment data
[ ]jp_83rHKfc.concise.fasta2015-04-17 18:49 200KPrediction: coiled-coil, solvent, alignment
[ ]jp_83rHKfc.concise.pdf2015-04-17 18:49 1.3MPDF prediction and alignment data
[ ]jp_83rHKfc.concise.ps2015-04-17 18:49 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_83rHKfc.fasta2015-04-17 18:43 192 Input query sequence in FASTA format
[ ]jp_83rHKfc.full_MSA.fasta2015-04-17 18:48 7.1MFull MSA before JPred filters in FASTA
[TXT]jp_83rHKfc.full_MSA.fasta.noGaps.html2015-04-17 18:49 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_83rHKfc.full_MSA.fasta.withGaps.html2015-04-17 18:49 21MFull MSA before JPred filters in FASTA
[ ]jp_83rHKfc.hmm2015-04-17 18:49 33KHHMer2 profile of the alignment
[TXT]jp_83rHKfc.html2015-04-17 18:49 411KHTML prediction and alignment data
[ ]jp_83rHKfc.input2015-04-17 17:30 184 Raw input data for analysis
[ ]jp_83rHKfc.jalview2015-04-17 18:49 4.4KJalview annotation file for alignment
[ ]jp_83rHKfc.jnet2015-04-17 18:49 6.5KJnet secondary structure output
[TXT]jp_83rHKfc.profile2015-04-17 18:47 29KPSIBLAST profile from alignment
[ ]jp_83rHKfc.pssm2015-04-17 18:49 38KPSIBLAST PSSM for Jnet
[TXT]jp_83rHKfc.results.html2016-02-15 12:19 81KJPred results page
[TXT]jp_83rHKfc.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_83rHKfc.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_83rHKfc.seq2015-04-17 17:30 192 Sequence data file
[TXT]jp_83rHKfc.simple.html2015-04-17 18:49 1.4KBrief HTML: sequence and prediction only
[TXT]jp_83rHKfc.svg.html2015-04-17 18:49 73KJalview SVG summary of results
[ ]jp_83rHKfc.tar.gz2015-04-17 18:49 6.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.