JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:55 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2g0da_.name2015-04-17 18:06 0 Job name flag file
[ ]jp_TVJm3QD.align2015-04-17 19:53 586KPSIBLAST alignment in FASTA format
[TXT]jp_TVJm3QD.als2015-04-17 19:54 3.8KAlscript command file for PS/PDF output
[ ]jp_TVJm3QD.blast.gz2015-04-17 19:51 3.5MCompressed PSIBLAST output file
[TXT]jp_TVJm3QD.coils.csv2015-04-17 19:53 2.4KCOILS output in CSV format
[ ]jp_TVJm3QD.coilseq.lupas_142015-04-17 19:53 17KCOILS output, window length 14
[ ]jp_TVJm3QD.coilseq.lupas_212015-04-17 19:53 17KCOILS output, window length 21
[ ]jp_TVJm3QD.coilseq.lupas_282015-04-17 19:53 17KCOILS output, window length 28
[ ]jp_TVJm3QD.concise2015-04-17 19:54 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_TVJm3QD.concise.blc2015-04-17 19:54 584KBLC format prediction and alignment data
[ ]jp_TVJm3QD.concise.fasta2015-04-17 19:54 591KPrediction: coiled-coil, solvent, alignment
[ ]jp_TVJm3QD.concise.pdf2015-04-17 19:55 4.1MPDF prediction and alignment data
[ ]jp_TVJm3QD.concise.ps2015-04-17 19:54 73MPrediction: coiled-coil, solvent, alignment
[ ]jp_TVJm3QD.fasta2015-04-17 19:46 422 Input query sequence in FASTA format
[ ]jp_TVJm3QD.full_MSA.fasta2015-04-17 19:52 7.4MFull MSA before JPred filters in FASTA
[TXT]jp_TVJm3QD.full_MSA.fasta.noGaps.html2015-04-17 19:55 966KFull MSA before JPred filters in FASTA
[TXT]jp_TVJm3QD.full_MSA.fasta.withGaps.html2015-04-17 19:55 24MFull MSA before JPred filters in FASTA
[ ]jp_TVJm3QD.hmm2015-04-17 19:53 76KHHMer2 profile of the alignment
[TXT]jp_TVJm3QD.html2015-04-17 19:54 892KHTML prediction and alignment data
[ ]jp_TVJm3QD.input2015-04-17 18:06 411 Raw input data for analysis
[ ]jp_TVJm3QD.jalview2015-04-17 19:54 9.0KJalview annotation file for alignment
[ ]jp_TVJm3QD.jnet2015-04-17 19:53 15KJnet secondary structure output
[TXT]jp_TVJm3QD.profile2015-04-17 19:50 64KPSIBLAST profile from alignment
[ ]jp_TVJm3QD.pssm2015-04-17 19:53 87KPSIBLAST PSSM for Jnet
[TXT]jp_TVJm3QD.results.html2016-02-15 12:19 165KJPred results page
[TXT]jp_TVJm3QD.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_TVJm3QD.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_TVJm3QD.seq2015-04-17 18:06 422 Sequence data file
[TXT]jp_TVJm3QD.simple.html2015-04-17 19:54 2.0KBrief HTML: sequence and prediction only
[TXT]jp_TVJm3QD.svg.html2015-04-17 19:55 157KJalview SVG summary of results
[ ]jp_TVJm3QD.tar.gz2015-04-17 19:55 11MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.