JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:53 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2g50a1.name2015-04-17 16:52 0 Job name flag file
[ ]jp_B3x9XtN.align2015-04-17 17:53 99KPSIBLAST alignment in FASTA format
[TXT]jp_B3x9XtN.als2015-04-17 17:53 2.5KAlscript command file for PS/PDF output
[ ]jp_B3x9XtN.blast.gz2015-04-17 17:52 1.9MCompressed PSIBLAST output file
[TXT]jp_B3x9XtN.coils.csv2015-04-17 17:53 642 COILS output in CSV format
[ ]jp_B3x9XtN.coilseq.lupas_142015-04-17 17:53 4.3KCOILS output, window length 14
[ ]jp_B3x9XtN.coilseq.lupas_212015-04-17 17:53 4.3KCOILS output, window length 21
[ ]jp_B3x9XtN.coilseq.lupas_282015-04-17 17:53 4.3KCOILS output, window length 28
[ ]jp_B3x9XtN.concise2015-04-17 17:53 192KPrediction: coiled-coil, solvent, alignment
[ ]jp_B3x9XtN.concise.blc2015-04-17 17:53 99KBLC format prediction and alignment data
[ ]jp_B3x9XtN.concise.fasta2015-04-17 17:53 101KPrediction: coiled-coil, solvent, alignment
[ ]jp_B3x9XtN.concise.pdf2015-04-17 17:53 681KPDF prediction and alignment data
[ ]jp_B3x9XtN.concise.ps2015-04-17 17:53 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_B3x9XtN.fasta2015-04-17 17:45 116 Input query sequence in FASTA format
[ ]jp_B3x9XtN.full_MSA.fasta2015-04-17 17:53 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_B3x9XtN.full_MSA.fasta.noGaps.html2015-04-17 17:53 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_B3x9XtN.full_MSA.fasta.withGaps.html2015-04-17 17:53 13MFull MSA before JPred filters in FASTA
[ ]jp_B3x9XtN.hmm2015-04-17 17:53 19KHHMer2 profile of the alignment
[TXT]jp_B3x9XtN.html2015-04-17 17:53 269KHTML prediction and alignment data
[ ]jp_B3x9XtN.input2015-04-17 16:52 109 Raw input data for analysis
[ ]jp_B3x9XtN.jalview2015-04-17 17:53 2.8KJalview annotation file for alignment
[ ]jp_B3x9XtN.jnet2015-04-17 17:53 3.8KJnet secondary structure output
[TXT]jp_B3x9XtN.profile2015-04-17 17:50 17KPSIBLAST profile from alignment
[ ]jp_B3x9XtN.pssm2015-04-17 17:53 22KPSIBLAST PSSM for Jnet
[TXT]jp_B3x9XtN.results.html2016-02-15 12:19 50KJPred results page
[TXT]jp_B3x9XtN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_B3x9XtN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_B3x9XtN.seq2015-04-17 16:52 116 Sequence data file
[TXT]jp_B3x9XtN.simple.html2015-04-17 17:53 1.3KBrief HTML: sequence and prediction only
[TXT]jp_B3x9XtN.svg.html2015-04-17 17:53 42KJalview SVG summary of results
[ ]jp_B3x9XtN.tar.gz2015-04-17 17:53 4.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.