JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[ ]jp_UEdgtkS.input2015-04-17 18:07 96 Raw input data for analysis
[ ]jp_UEdgtkS.seq2015-04-17 18:07 103 Sequence data file
[TXT]d2gf4a1.name2015-04-17 18:07 0 Job name flag file
[ ]jp_UEdgtkS.fasta2015-04-17 19:46 103 Input query sequence in FASTA format
[TXT]jp_UEdgtkS.profile2015-04-17 19:49 15KPSIBLAST profile from alignment
[ ]jp_UEdgtkS.blast.gz2015-04-17 19:51 29KCompressed PSIBLAST output file
[ ]jp_UEdgtkS.full_MSA.fasta2015-04-17 19:51 22KFull MSA before JPred filters in FASTA
[ ]jp_UEdgtkS.align2015-04-17 19:51 11KPSIBLAST alignment in FASTA format
[ ]jp_UEdgtkS.pssm2015-04-17 19:51 19KPSIBLAST PSSM for Jnet
[ ]jp_UEdgtkS.hmm2015-04-17 19:51 17KHHMer2 profile of the alignment
[ ]jp_UEdgtkS.jnet2015-04-17 19:51 3.3KJnet secondary structure output
[ ]jp_UEdgtkS.coilseq.lupas_212015-04-17 19:51 3.7KCOILS output, window length 21
[ ]jp_UEdgtkS.coilseq.lupas_142015-04-17 19:51 3.7KCOILS output, window length 14
[ ]jp_UEdgtkS.coilseq.lupas_282015-04-17 19:51 3.7KCOILS output, window length 28
[TXT]jp_UEdgtkS.coils.csv2015-04-17 19:51 564 COILS output in CSV format
[ ]jp_UEdgtkS.concise2015-04-17 19:51 25KPrediction: coiled-coil, solvent, alignment
[TXT]jp_UEdgtkS.html2015-04-17 19:51 43KHTML prediction and alignment data
[TXT]jp_UEdgtkS.simple.html2015-04-17 19:51 1.1KBrief HTML: sequence and prediction only
[ ]jp_UEdgtkS.jalview2015-04-17 19:51 2.6KJalview annotation file for alignment
[ ]jp_UEdgtkS.concise.fasta2015-04-17 19:51 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_UEdgtkS.concise.blc2015-04-17 19:51 12KBLC format prediction and alignment data
[TXT]jp_UEdgtkS.als2015-04-17 19:51 1.9KAlscript command file for PS/PDF output
[ ]jp_UEdgtkS.concise.ps2015-04-17 19:51 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_UEdgtkS.concise.pdf2015-04-17 19:51 82KPDF prediction and alignment data
[TXT]jp_UEdgtkS.full_MSA.fasta.withGaps.html2015-04-17 19:51 98KFull MSA before JPred filters in FASTA
[TXT]jp_UEdgtkS.full_MSA.fasta.noGaps.html2015-04-17 19:51 35KFull MSA before JPred filters in FASTA
[TXT]jp_UEdgtkS.svg.html2015-04-17 19:51 38KJalview SVG summary of results
[TXT]LOG2015-04-17 19:51 4.7KJPred server log file
[ ]jp_UEdgtkS.tar.gz2015-04-17 19:51 169KArchive containing complete results
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]jp_UEdgtkS.results.html2016-02-15 12:19 46KJPred results page
[TXT]jp_UEdgtkS.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_UEdgtkS.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.