JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2gjva1.name2015-04-17 16:19 0 Job name flag file
[ ]jp_7Nw2_W4.align2015-04-17 16:50 10KPSIBLAST alignment in FASTA format
[TXT]jp_7Nw2_W4.als2015-04-17 16:50 2.4KAlscript command file for PS/PDF output
[ ]jp_7Nw2_W4.blast.gz2015-04-17 16:50 24KCompressed PSIBLAST output file
[TXT]jp_7Nw2_W4.coils.csv2015-04-17 16:50 834 COILS output in CSV format
[ ]jp_7Nw2_W4.coilseq.lupas_142015-04-17 16:50 5.6KCOILS output, window length 14
[ ]jp_7Nw2_W4.coilseq.lupas_212015-04-17 16:50 5.6KCOILS output, window length 21
[ ]jp_7Nw2_W4.coilseq.lupas_282015-04-17 16:50 5.6KCOILS output, window length 28
[ ]jp_7Nw2_W4.concise2015-04-17 16:50 26KPrediction: coiled-coil, solvent, alignment
[ ]jp_7Nw2_W4.concise.blc2015-04-17 16:50 12KBLC format prediction and alignment data
[ ]jp_7Nw2_W4.concise.fasta2015-04-17 16:50 12KPrediction: coiled-coil, solvent, alignment
[ ]jp_7Nw2_W4.concise.pdf2015-04-17 16:50 85KPDF prediction and alignment data
[ ]jp_7Nw2_W4.concise.ps2015-04-17 16:50 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_7Nw2_W4.fasta2015-04-17 16:46 148 Input query sequence in FASTA format
[ ]jp_7Nw2_W4.full_MSA.fasta2015-04-17 16:50 27KFull MSA before JPred filters in FASTA
[TXT]jp_7Nw2_W4.full_MSA.fasta.noGaps.html2015-04-17 16:50 23KFull MSA before JPred filters in FASTA
[TXT]jp_7Nw2_W4.full_MSA.fasta.withGaps.html2015-04-17 16:50 130KFull MSA before JPred filters in FASTA
[ ]jp_7Nw2_W4.hmm2015-04-17 16:50 25KHHMer2 profile of the alignment
[TXT]jp_7Nw2_W4.html2015-04-17 16:50 38KHTML prediction and alignment data
[ ]jp_7Nw2_W4.input2015-04-17 16:19 141 Raw input data for analysis
[ ]jp_7Nw2_W4.jalview2015-04-17 16:50 3.5KJalview annotation file for alignment
[ ]jp_7Nw2_W4.jnet2015-04-17 16:50 5.0KJnet secondary structure output
[TXT]jp_7Nw2_W4.profile2015-04-17 16:49 22KPSIBLAST profile from alignment
[ ]jp_7Nw2_W4.pssm2015-04-17 16:50 29KPSIBLAST PSSM for Jnet
[TXT]jp_7Nw2_W4.results.html2016-02-15 12:19 63KJPred results page
[TXT]jp_7Nw2_W4.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7Nw2_W4.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_7Nw2_W4.seq2015-04-17 16:19 148 Sequence data file
[TXT]jp_7Nw2_W4.simple.html2015-04-17 16:50 1.3KBrief HTML: sequence and prediction only
[TXT]jp_7Nw2_W4.svg.html2015-04-17 16:51 54KJalview SVG summary of results
[ ]jp_7Nw2_W4.tar.gz2015-04-17 16:51 185KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.