JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:26 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2gtqa3.name2015-04-17 17:51 0 Job name flag file
[ ]jp_mewT9iI.align2015-04-17 19:25 107KPSIBLAST alignment in FASTA format
[TXT]jp_mewT9iI.als2015-04-17 19:25 2.4KAlscript command file for PS/PDF output
[ ]jp_mewT9iI.blast.gz2015-04-17 19:25 613KCompressed PSIBLAST output file
[TXT]jp_mewT9iI.coils.csv2015-04-17 19:25 636 COILS output in CSV format
[ ]jp_mewT9iI.coilseq.lupas_142015-04-17 19:25 4.2KCOILS output, window length 14
[ ]jp_mewT9iI.coilseq.lupas_212015-04-17 19:25 4.2KCOILS output, window length 21
[ ]jp_mewT9iI.coilseq.lupas_282015-04-17 19:25 4.2KCOILS output, window length 28
[ ]jp_mewT9iI.concise2015-04-17 19:25 206KPrediction: coiled-coil, solvent, alignment
[ ]jp_mewT9iI.concise.blc2015-04-17 19:25 107KBLC format prediction and alignment data
[ ]jp_mewT9iI.concise.fasta2015-04-17 19:25 108KPrediction: coiled-coil, solvent, alignment
[ ]jp_mewT9iI.concise.pdf2015-04-17 19:26 712KPDF prediction and alignment data
[ ]jp_mewT9iI.concise.ps2015-04-17 19:25 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_mewT9iI.fasta2015-04-17 19:22 115 Input query sequence in FASTA format
[ ]jp_mewT9iI.full_MSA.fasta2015-04-17 19:25 917KFull MSA before JPred filters in FASTA
[TXT]jp_mewT9iI.full_MSA.fasta.noGaps.html2015-04-17 19:26 277KFull MSA before JPred filters in FASTA
[TXT]jp_mewT9iI.full_MSA.fasta.withGaps.html2015-04-17 19:26 3.0MFull MSA before JPred filters in FASTA
[ ]jp_mewT9iI.hmm2015-04-17 19:25 19KHHMer2 profile of the alignment
[TXT]jp_mewT9iI.html2015-04-17 19:25 290KHTML prediction and alignment data
[ ]jp_mewT9iI.input2015-04-17 17:51 108 Raw input data for analysis
[ ]jp_mewT9iI.jalview2015-04-17 19:25 2.8KJalview annotation file for alignment
[ ]jp_mewT9iI.jnet2015-04-17 19:25 3.8KJnet secondary structure output
[TXT]jp_mewT9iI.profile2015-04-17 19:24 16KPSIBLAST profile from alignment
[ ]jp_mewT9iI.pssm2015-04-17 19:25 22KPSIBLAST PSSM for Jnet
[TXT]jp_mewT9iI.results.html2016-02-15 12:19 49KJPred results page
[TXT]jp_mewT9iI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mewT9iI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mewT9iI.seq2015-04-17 17:51 115 Sequence data file
[TXT]jp_mewT9iI.simple.html2015-04-17 19:25 1.3KBrief HTML: sequence and prediction only
[TXT]jp_mewT9iI.svg.html2015-04-17 19:26 41KJalview SVG summary of results
[ ]jp_mewT9iI.tar.gz2015-04-17 19:26 1.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.