JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:54 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2h1va_.name2015-04-17 16:52 0 Job name flag file
[ ]jp_xg4urNJ.align2015-04-17 17:53 260KPSIBLAST alignment in FASTA format
[TXT]jp_xg4urNJ.als2015-04-17 17:53 4.2KAlscript command file for PS/PDF output
[ ]jp_xg4urNJ.blast.gz2015-04-17 17:52 5.4MCompressed PSIBLAST output file
[TXT]jp_xg4urNJ.coils.csv2015-04-17 17:53 1.8KCOILS output in CSV format
[ ]jp_xg4urNJ.coilseq.lupas_142015-04-17 17:53 13KCOILS output, window length 14
[ ]jp_xg4urNJ.coilseq.lupas_212015-04-17 17:53 13KCOILS output, window length 21
[ ]jp_xg4urNJ.coilseq.lupas_282015-04-17 17:53 13KCOILS output, window length 28
[ ]jp_xg4urNJ.concise2015-04-17 17:53 517KPrediction: coiled-coil, solvent, alignment
[ ]jp_xg4urNJ.concise.blc2015-04-17 17:53 260KBLC format prediction and alignment data
[ ]jp_xg4urNJ.concise.fasta2015-04-17 17:53 263KPrediction: coiled-coil, solvent, alignment
[ ]jp_xg4urNJ.concise.pdf2015-04-17 17:54 1.8MPDF prediction and alignment data
[ ]jp_xg4urNJ.concise.ps2015-04-17 17:53 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_xg4urNJ.fasta2015-04-17 17:47 326 Input query sequence in FASTA format
[ ]jp_xg4urNJ.full_MSA.fasta2015-04-17 17:53 9.7MFull MSA before JPred filters in FASTA
[TXT]jp_xg4urNJ.full_MSA.fasta.noGaps.html2015-04-17 17:54 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_xg4urNJ.full_MSA.fasta.withGaps.html2015-04-17 17:54 28MFull MSA before JPred filters in FASTA
[ ]jp_xg4urNJ.hmm2015-04-17 17:53 58KHHMer2 profile of the alignment
[TXT]jp_xg4urNJ.html2015-04-17 17:53 445KHTML prediction and alignment data
[ ]jp_xg4urNJ.input2015-04-17 16:52 316 Raw input data for analysis
[ ]jp_xg4urNJ.jalview2015-04-17 17:53 7.1KJalview annotation file for alignment
[ ]jp_xg4urNJ.jnet2015-04-17 17:53 11KJnet secondary structure output
[TXT]jp_xg4urNJ.profile2015-04-17 17:50 49KPSIBLAST profile from alignment
[ ]jp_xg4urNJ.pssm2015-04-17 17:53 66KPSIBLAST PSSM for Jnet
[TXT]jp_xg4urNJ.results.html2016-02-15 12:20 132KJPred results page
[TXT]jp_xg4urNJ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_xg4urNJ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_xg4urNJ.seq2015-04-17 16:52 326 Sequence data file
[TXT]jp_xg4urNJ.simple.html2015-04-17 17:53 1.9KBrief HTML: sequence and prediction only
[TXT]jp_xg4urNJ.svg.html2015-04-17 17:54 124KJalview SVG summary of results
[ ]jp_xg4urNJ.tar.gz2015-04-17 17:54 11MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.