JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:52 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hiya1.name2015-04-17 16:53 0 Job name flag file
[ ]jp_A88CyJm.align2015-04-17 17:51 157KPSIBLAST alignment in FASTA format
[TXT]jp_A88CyJm.als2015-04-17 17:51 3.3KAlscript command file for PS/PDF output
[ ]jp_A88CyJm.blast.gz2015-04-17 17:51 588KCompressed PSIBLAST output file
[TXT]jp_A88CyJm.coils.csv2015-04-17 17:51 1.1KCOILS output in CSV format
[ ]jp_A88CyJm.coilseq.lupas_142015-04-17 17:51 7.5KCOILS output, window length 14
[ ]jp_A88CyJm.coilseq.lupas_212015-04-17 17:51 7.5KCOILS output, window length 21
[ ]jp_A88CyJm.coilseq.lupas_282015-04-17 17:51 7.5KCOILS output, window length 28
[ ]jp_A88CyJm.concise2015-04-17 17:51 310KPrediction: coiled-coil, solvent, alignment
[ ]jp_A88CyJm.concise.blc2015-04-17 17:51 158KBLC format prediction and alignment data
[ ]jp_A88CyJm.concise.fasta2015-04-17 17:51 159KPrediction: coiled-coil, solvent, alignment
[ ]jp_A88CyJm.concise.pdf2015-04-17 17:52 1.1MPDF prediction and alignment data
[ ]jp_A88CyJm.concise.ps2015-04-17 17:51 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_A88CyJm.fasta2015-04-17 17:48 194 Input query sequence in FASTA format
[ ]jp_A88CyJm.full_MSA.fasta2015-04-17 17:51 724KFull MSA before JPred filters in FASTA
[TXT]jp_A88CyJm.full_MSA.fasta.noGaps.html2015-04-17 17:52 351KFull MSA before JPred filters in FASTA
[TXT]jp_A88CyJm.full_MSA.fasta.withGaps.html2015-04-17 17:52 4.0MFull MSA before JPred filters in FASTA
[ ]jp_A88CyJm.hmm2015-04-17 17:51 34KHHMer2 profile of the alignment
[TXT]jp_A88CyJm.html2015-04-17 17:51 329KHTML prediction and alignment data
[ ]jp_A88CyJm.input2015-04-17 16:53 186 Raw input data for analysis
[ ]jp_A88CyJm.jalview2015-04-17 17:51 4.4KJalview annotation file for alignment
[ ]jp_A88CyJm.jnet2015-04-17 17:51 6.6KJnet secondary structure output
[TXT]jp_A88CyJm.profile2015-04-17 17:50 29KPSIBLAST profile from alignment
[ ]jp_A88CyJm.pssm2015-04-17 17:51 38KPSIBLAST PSSM for Jnet
[TXT]jp_A88CyJm.results.html2016-02-15 12:20 82KJPred results page
[TXT]jp_A88CyJm.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_A88CyJm.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_A88CyJm.seq2015-04-17 16:53 194 Sequence data file
[TXT]jp_A88CyJm.simple.html2015-04-17 17:51 1.5KBrief HTML: sequence and prediction only
[TXT]jp_A88CyJm.svg.html2015-04-17 17:52 74KJalview SVG summary of results
[ ]jp_A88CyJm.tar.gz2015-04-17 17:52 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.