JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:52 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hnga1.name2015-04-17 15:39 0 Job name flag file
[ ]jp_yYiA7Jt.align2015-04-17 15:52 9.7KPSIBLAST alignment in FASTA format
[TXT]jp_yYiA7Jt.als2015-04-17 15:52 2.0KAlscript command file for PS/PDF output
[ ]jp_yYiA7Jt.blast.gz2015-04-17 15:52 29KCompressed PSIBLAST output file
[TXT]jp_yYiA7Jt.coils.csv2015-04-17 15:52 774 COILS output in CSV format
[ ]jp_yYiA7Jt.coilseq.lupas_142015-04-17 15:52 5.2KCOILS output, window length 14
[ ]jp_yYiA7Jt.coilseq.lupas_212015-04-17 15:52 5.2KCOILS output, window length 21
[ ]jp_yYiA7Jt.coilseq.lupas_282015-04-17 15:52 5.2KCOILS output, window length 28
[ ]jp_yYiA7Jt.concise2015-04-17 15:52 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_yYiA7Jt.concise.blc2015-04-17 15:52 11KBLC format prediction and alignment data
[ ]jp_yYiA7Jt.concise.fasta2015-04-17 15:52 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_yYiA7Jt.concise.pdf2015-04-17 15:52 76KPDF prediction and alignment data
[ ]jp_yYiA7Jt.concise.ps2015-04-17 15:52 1.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_yYiA7Jt.fasta2015-04-17 15:50 138 Input query sequence in FASTA format
[ ]jp_yYiA7Jt.full_MSA.fasta2015-04-17 15:52 25KFull MSA before JPred filters in FASTA
[TXT]jp_yYiA7Jt.full_MSA.fasta.noGaps.html2015-04-17 15:52 26KFull MSA before JPred filters in FASTA
[TXT]jp_yYiA7Jt.full_MSA.fasta.withGaps.html2015-04-17 15:52 87KFull MSA before JPred filters in FASTA
[ ]jp_yYiA7Jt.hmm2015-04-17 15:52 23KHHMer2 profile of the alignment
[TXT]jp_yYiA7Jt.html2015-04-17 15:52 35KHTML prediction and alignment data
[ ]jp_yYiA7Jt.input2015-04-17 15:39 131 Raw input data for analysis
[ ]jp_yYiA7Jt.jalview2015-04-17 15:52 3.3KJalview annotation file for alignment
[ ]jp_yYiA7Jt.jnet2015-04-17 15:52 4.6KJnet secondary structure output
[TXT]jp_yYiA7Jt.profile2015-04-17 15:51 20KPSIBLAST profile from alignment
[ ]jp_yYiA7Jt.pssm2015-04-17 15:52 27KPSIBLAST PSSM for Jnet
[TXT]jp_yYiA7Jt.results.html2016-02-15 12:20 57KJPred results page
[TXT]jp_yYiA7Jt.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_yYiA7Jt.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_yYiA7Jt.seq2015-04-17 15:39 138 Sequence data file
[TXT]jp_yYiA7Jt.simple.html2015-04-17 15:52 1.2KBrief HTML: sequence and prediction only
[TXT]jp_yYiA7Jt.svg.html2015-04-17 15:52 49KJalview SVG summary of results
[ ]jp_yYiA7Jt.tar.gz2015-04-17 15:52 162KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.