JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:52 4.9KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hpja_.name2015-04-17 16:19 0 Job name flag file
[ ]jp_d3IJQ9z.align2015-04-17 16:52 71KPSIBLAST alignment in FASTA format
[TXT]jp_d3IJQ9z.als2015-04-17 16:52 2.2KAlscript command file for PS/PDF output
[ ]jp_d3IJQ9z.blast.gz2015-04-17 16:52 312KCompressed PSIBLAST output file
[TXT]jp_d3IJQ9z.coils.csv2015-04-17 16:52 624 COILS output in CSV format
[ ]jp_d3IJQ9z.coilseq.lupas_142015-04-17 16:52 4.2KCOILS output, window length 14
[ ]jp_d3IJQ9z.coilseq.lupas_212015-04-17 16:52 4.2KCOILS output, window length 21
[ ]jp_d3IJQ9z.coilseq.lupas_282015-04-17 16:52 4.2KCOILS output, window length 28
[ ]jp_d3IJQ9z.concise2015-04-17 16:52 138KPrediction: coiled-coil, solvent, alignment
[ ]jp_d3IJQ9z.concise.blc2015-04-17 16:52 71KBLC format prediction and alignment data
[ ]jp_d3IJQ9z.concise.fasta2015-04-17 16:52 72KPrediction: coiled-coil, solvent, alignment
[ ]jp_d3IJQ9z.concise.pdf2015-04-17 16:52 2.2KPDF prediction and alignment data
[ ]jp_d3IJQ9z.concise.ps2015-04-17 16:52 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_d3IJQ9z.fasta2015-04-17 16:47 113 Input query sequence in FASTA format
[ ]jp_d3IJQ9z.full_MSA.fasta2015-04-17 16:52 572KFull MSA before JPred filters in FASTA
[TXT]jp_d3IJQ9z.full_MSA.fasta.noGaps.html2015-04-17 16:52 218KFull MSA before JPred filters in FASTA
[TXT]jp_d3IJQ9z.full_MSA.fasta.withGaps.html2015-04-17 16:52 2.4MFull MSA before JPred filters in FASTA
[ ]jp_d3IJQ9z.hmm2015-04-17 16:52 19KHHMer2 profile of the alignment
[TXT]jp_d3IJQ9z.html2015-04-17 16:52 200KHTML prediction and alignment data
[ ]jp_d3IJQ9z.input2015-04-17 16:19 106 Raw input data for analysis
[ ]jp_d3IJQ9z.jalview2015-04-17 16:52 2.8KJalview annotation file for alignment
[ ]jp_d3IJQ9z.jnet2015-04-17 16:52 3.7KJnet secondary structure output
[TXT]jp_d3IJQ9z.profile2015-04-17 16:51 16KPSIBLAST profile from alignment
[ ]jp_d3IJQ9z.pssm2015-04-17 16:52 21KPSIBLAST PSSM for Jnet
[TXT]jp_d3IJQ9z.results.html2016-02-15 12:20 50KJPred results page
[TXT]jp_d3IJQ9z.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_d3IJQ9z.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_d3IJQ9z.seq2015-04-17 16:19 113 Sequence data file
[TXT]jp_d3IJQ9z.simple.html2015-04-17 16:52 1.2KBrief HTML: sequence and prediction only
[TXT]jp_d3IJQ9z.svg.html2015-04-17 16:52 42KJalview SVG summary of results
[ ]jp_d3IJQ9z.tar.gz2015-04-17 16:52 761KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.