JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:59 4.9KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hqsa2.name2015-04-17 19:21 0 Job name flag file
[ ]jp_cEM_5Lr.align2015-04-17 21:58 148KPSIBLAST alignment in FASTA format
[TXT]jp_cEM_5Lr.als2015-04-17 21:59 2.5KAlscript command file for PS/PDF output
[ ]jp_cEM_5Lr.blast.gz2015-04-17 21:58 656KCompressed PSIBLAST output file
[TXT]jp_cEM_5Lr.coils.csv2015-04-17 21:58 864 COILS output in CSV format
[ ]jp_cEM_5Lr.coilseq.lupas_142015-04-17 21:58 5.8KCOILS output, window length 14
[ ]jp_cEM_5Lr.coilseq.lupas_212015-04-17 21:58 5.8KCOILS output, window length 21
[ ]jp_cEM_5Lr.coilseq.lupas_282015-04-17 21:58 5.8KCOILS output, window length 28
[ ]jp_cEM_5Lr.concise2015-04-17 21:58 288KPrediction: coiled-coil, solvent, alignment
[ ]jp_cEM_5Lr.concise.blc2015-04-17 21:59 148KBLC format prediction and alignment data
[ ]jp_cEM_5Lr.concise.fasta2015-04-17 21:59 149KPrediction: coiled-coil, solvent, alignment
[ ]jp_cEM_5Lr.concise.pdf2015-04-17 21:59 2.2KPDF prediction and alignment data
[ ]jp_cEM_5Lr.concise.ps2015-04-17 21:59 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_cEM_5Lr.fasta2015-04-17 21:51 153 Input query sequence in FASTA format
[ ]jp_cEM_5Lr.full_MSA.fasta2015-04-17 21:58 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_cEM_5Lr.full_MSA.fasta.noGaps.html2015-04-17 21:59 358KFull MSA before JPred filters in FASTA
[TXT]jp_cEM_5Lr.full_MSA.fasta.withGaps.html2015-04-17 21:59 4.6MFull MSA before JPred filters in FASTA
[ ]jp_cEM_5Lr.hmm2015-04-17 21:58 26KHHMer2 profile of the alignment
[TXT]jp_cEM_5Lr.html2015-04-17 21:59 343KHTML prediction and alignment data
[ ]jp_cEM_5Lr.input2015-04-17 19:21 146 Raw input data for analysis
[ ]jp_cEM_5Lr.jalview2015-04-17 21:59 3.6KJalview annotation file for alignment
[ ]jp_cEM_5Lr.jnet2015-04-17 21:58 5.1KJnet secondary structure output
[TXT]jp_cEM_5Lr.profile2015-04-17 21:56 23KPSIBLAST profile from alignment
[ ]jp_cEM_5Lr.pssm2015-04-17 21:58 30KPSIBLAST PSSM for Jnet
[TXT]jp_cEM_5Lr.results.html2016-02-15 12:20 65KJPred results page
[TXT]jp_cEM_5Lr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_cEM_5Lr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_cEM_5Lr.seq2015-04-17 19:21 153 Sequence data file
[TXT]jp_cEM_5Lr.simple.html2015-04-17 21:59 1.3KBrief HTML: sequence and prediction only
[TXT]jp_cEM_5Lr.svg.html2015-04-17 21:59 56KJalview SVG summary of results
[ ]jp_cEM_5Lr.tar.gz2015-04-17 21:59 1.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.