JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:00 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hqsc_.name2015-04-17 16:53 0 Job name flag file
[ ]jp_EclpptW.align2015-04-17 17:59 108KPSIBLAST alignment in FASTA format
[TXT]jp_EclpptW.als2015-04-17 17:59 2.0KAlscript command file for PS/PDF output
[ ]jp_EclpptW.blast.gz2015-04-17 17:58 6.1MCompressed PSIBLAST output file
[TXT]jp_EclpptW.coils.csv2015-04-17 17:59 672 COILS output in CSV format
[ ]jp_EclpptW.coilseq.lupas_142015-04-17 17:59 4.5KCOILS output, window length 14
[ ]jp_EclpptW.coilseq.lupas_212015-04-17 17:59 4.5KCOILS output, window length 21
[ ]jp_EclpptW.coilseq.lupas_282015-04-17 17:59 4.5KCOILS output, window length 28
[ ]jp_EclpptW.concise2015-04-17 17:59 209KPrediction: coiled-coil, solvent, alignment
[ ]jp_EclpptW.concise.blc2015-04-17 17:59 108KBLC format prediction and alignment data
[ ]jp_EclpptW.concise.fasta2015-04-17 17:59 110KPrediction: coiled-coil, solvent, alignment
[ ]jp_EclpptW.concise.pdf2015-04-17 17:59 688KPDF prediction and alignment data
[ ]jp_EclpptW.concise.ps2015-04-17 17:59 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_EclpptW.fasta2015-04-17 17:48 121 Input query sequence in FASTA format
[ ]jp_EclpptW.full_MSA.fasta2015-04-17 17:59 8.3MFull MSA before JPred filters in FASTA
[TXT]jp_EclpptW.full_MSA.fasta.noGaps.html2015-04-17 17:59 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_EclpptW.full_MSA.fasta.withGaps.html2015-04-17 17:59 32MFull MSA before JPred filters in FASTA
[ ]jp_EclpptW.hmm2015-04-17 17:59 20KHHMer2 profile of the alignment
[TXT]jp_EclpptW.html2015-04-17 17:59 286KHTML prediction and alignment data
[ ]jp_EclpptW.input2015-04-17 16:53 114 Raw input data for analysis
[ ]jp_EclpptW.jalview2015-04-17 17:59 3.0KJalview annotation file for alignment
[ ]jp_EclpptW.jnet2015-04-17 17:59 4.0KJnet secondary structure output
[TXT]jp_EclpptW.profile2015-04-17 17:57 17KPSIBLAST profile from alignment
[ ]jp_EclpptW.pssm2015-04-17 17:59 23KPSIBLAST PSSM for Jnet
[TXT]jp_EclpptW.results.html2016-02-15 12:20 52KJPred results page
[TXT]jp_EclpptW.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_EclpptW.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_EclpptW.seq2015-04-17 16:53 121 Sequence data file
[TXT]jp_EclpptW.simple.html2015-04-17 17:59 1.2KBrief HTML: sequence and prediction only
[TXT]jp_EclpptW.svg.html2015-04-17 18:00 44KJalview SVG summary of results
[ ]jp_EclpptW.tar.gz2015-04-17 18:00 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.