JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:52 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2huja1.name2015-04-17 18:07 0 Job name flag file
[ ]jp_OJOmZcR.align2015-04-17 19:52 18KPSIBLAST alignment in FASTA format
[TXT]jp_OJOmZcR.als2015-04-17 19:52 1.8KAlscript command file for PS/PDF output
[ ]jp_OJOmZcR.blast.gz2015-04-17 19:52 41KCompressed PSIBLAST output file
[TXT]jp_OJOmZcR.coils.csv2015-04-17 19:52 750 COILS output in CSV format
[ ]jp_OJOmZcR.coilseq.lupas_142015-04-17 19:52 5.0KCOILS output, window length 14
[ ]jp_OJOmZcR.coilseq.lupas_212015-04-17 19:52 5.0KCOILS output, window length 21
[ ]jp_OJOmZcR.coilseq.lupas_282015-04-17 19:52 5.0KCOILS output, window length 28
[ ]jp_OJOmZcR.concise2015-04-17 19:52 39KPrediction: coiled-coil, solvent, alignment
[ ]jp_OJOmZcR.concise.blc2015-04-17 19:52 20KBLC format prediction and alignment data
[ ]jp_OJOmZcR.concise.fasta2015-04-17 19:52 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_OJOmZcR.concise.pdf2015-04-17 19:52 132KPDF prediction and alignment data
[ ]jp_OJOmZcR.concise.ps2015-04-17 19:52 2.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_OJOmZcR.fasta2015-04-17 19:47 134 Input query sequence in FASTA format
[ ]jp_OJOmZcR.full_MSA.fasta2015-04-17 19:52 27KFull MSA before JPred filters in FASTA
[TXT]jp_OJOmZcR.full_MSA.fasta.noGaps.html2015-04-17 19:52 42KFull MSA before JPred filters in FASTA
[TXT]jp_OJOmZcR.full_MSA.fasta.withGaps.html2015-04-17 19:52 94KFull MSA before JPred filters in FASTA
[ ]jp_OJOmZcR.hmm2015-04-17 19:52 23KHHMer2 profile of the alignment
[TXT]jp_OJOmZcR.html2015-04-17 19:52 58KHTML prediction and alignment data
[ ]jp_OJOmZcR.input2015-04-17 18:07 127 Raw input data for analysis
[ ]jp_OJOmZcR.jalview2015-04-17 19:52 3.3KJalview annotation file for alignment
[ ]jp_OJOmZcR.jnet2015-04-17 19:52 4.4KJnet secondary structure output
[TXT]jp_OJOmZcR.profile2015-04-17 19:50 19KPSIBLAST profile from alignment
[ ]jp_OJOmZcR.pssm2015-04-17 19:52 26KPSIBLAST PSSM for Jnet
[TXT]jp_OJOmZcR.results.html2016-02-15 12:20 55KJPred results page
[TXT]jp_OJOmZcR.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_OJOmZcR.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_OJOmZcR.seq2015-04-17 18:07 134 Sequence data file
[TXT]jp_OJOmZcR.simple.html2015-04-17 19:52 1.2KBrief HTML: sequence and prediction only
[TXT]jp_OJOmZcR.svg.html2015-04-17 19:52 47KJalview SVG summary of results
[ ]jp_OJOmZcR.tar.gz2015-04-17 19:52 262KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.