JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:19 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2i06a_.name2015-04-17 16:20 0 Job name flag file
[ ]jp_DnUiJuw.align2015-04-17 17:19 63KPSIBLAST alignment in FASTA format
[TXT]jp_DnUiJuw.als2015-04-17 17:19 4.0KAlscript command file for PS/PDF output
[ ]jp_DnUiJuw.blast.gz2015-04-17 17:19 170KCompressed PSIBLAST output file
[TXT]jp_DnUiJuw.coils.csv2015-04-17 17:19 1.8KCOILS output in CSV format
[ ]jp_DnUiJuw.coilseq.lupas_142015-04-17 17:19 13KCOILS output, window length 14
[ ]jp_DnUiJuw.coilseq.lupas_212015-04-17 17:19 13KCOILS output, window length 21
[ ]jp_DnUiJuw.coilseq.lupas_282015-04-17 17:19 13KCOILS output, window length 28
[ ]jp_DnUiJuw.concise2015-04-17 17:19 135KPrediction: coiled-coil, solvent, alignment
[ ]jp_DnUiJuw.concise.blc2015-04-17 17:19 67KBLC format prediction and alignment data
[ ]jp_DnUiJuw.concise.fasta2015-04-17 17:19 66KPrediction: coiled-coil, solvent, alignment
[ ]jp_DnUiJuw.concise.pdf2015-04-17 17:19 480KPDF prediction and alignment data
[ ]jp_DnUiJuw.concise.ps2015-04-17 17:19 8.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_DnUiJuw.fasta2015-04-17 16:48 322 Input query sequence in FASTA format
[ ]jp_DnUiJuw.full_MSA.fasta2015-04-17 17:19 318KFull MSA before JPred filters in FASTA
[TXT]jp_DnUiJuw.full_MSA.fasta.noGaps.html2015-04-17 17:19 131KFull MSA before JPred filters in FASTA
[TXT]jp_DnUiJuw.full_MSA.fasta.withGaps.html2015-04-17 17:19 1.5MFull MSA before JPred filters in FASTA
[ ]jp_DnUiJuw.hmm2015-04-17 17:19 57KHHMer2 profile of the alignment
[TXT]jp_DnUiJuw.html2015-04-17 17:19 128KHTML prediction and alignment data
[ ]jp_DnUiJuw.input2015-04-17 16:20 312 Raw input data for analysis
[ ]jp_DnUiJuw.jalview2015-04-17 17:19 6.9KJalview annotation file for alignment
[ ]jp_DnUiJuw.jnet2015-04-17 17:19 11KJnet secondary structure output
[TXT]jp_DnUiJuw.profile2015-04-17 17:12 49KPSIBLAST profile from alignment
[ ]jp_DnUiJuw.pssm2015-04-17 17:19 66KPSIBLAST PSSM for Jnet
[TXT]jp_DnUiJuw.results.html2016-02-15 12:20 129KJPred results page
[TXT]jp_DnUiJuw.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_DnUiJuw.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_DnUiJuw.seq2015-04-17 16:20 322 Sequence data file
[TXT]jp_DnUiJuw.simple.html2015-04-17 17:19 1.9KBrief HTML: sequence and prediction only
[TXT]jp_DnUiJuw.svg.html2015-04-17 17:19 121KJalview SVG summary of results
[ ]jp_DnUiJuw.tar.gz2015-04-17 17:19 957KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.