JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2i5ha1.name2015-04-17 16:54 0 Job name flag file
[ ]jp_hHqirZe.align2015-04-17 17:56 25KPSIBLAST alignment in FASTA format
[TXT]jp_hHqirZe.als2015-04-17 17:56 3.0KAlscript command file for PS/PDF output
[ ]jp_hHqirZe.blast.gz2015-04-17 17:56 532KCompressed PSIBLAST output file
[TXT]jp_hHqirZe.coils.csv2015-04-17 17:56 1.1KCOILS output in CSV format
[ ]jp_hHqirZe.coilseq.lupas_142015-04-17 17:56 7.5KCOILS output, window length 14
[ ]jp_hHqirZe.coilseq.lupas_212015-04-17 17:56 7.5KCOILS output, window length 21
[ ]jp_hHqirZe.coilseq.lupas_282015-04-17 17:56 7.5KCOILS output, window length 28
[ ]jp_hHqirZe.concise2015-04-17 17:56 56KPrediction: coiled-coil, solvent, alignment
[ ]jp_hHqirZe.concise.blc2015-04-17 17:56 28KBLC format prediction and alignment data
[ ]jp_hHqirZe.concise.fasta2015-04-17 17:56 27KPrediction: coiled-coil, solvent, alignment
[ ]jp_hHqirZe.concise.pdf2015-04-17 17:56 177KPDF prediction and alignment data
[ ]jp_hHqirZe.concise.ps2015-04-17 17:56 3.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_hHqirZe.fasta2015-04-17 17:51 193 Input query sequence in FASTA format
[ ]jp_hHqirZe.full_MSA.fasta2015-04-17 17:56 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_hHqirZe.full_MSA.fasta.noGaps.html2015-04-17 17:56 807KFull MSA before JPred filters in FASTA
[TXT]jp_hHqirZe.full_MSA.fasta.withGaps.html2015-04-17 17:56 9.3MFull MSA before JPred filters in FASTA
[ ]jp_hHqirZe.hmm2015-04-17 17:56 33KHHMer2 profile of the alignment
[TXT]jp_hHqirZe.html2015-04-17 17:56 67KHTML prediction and alignment data
[ ]jp_hHqirZe.input2015-04-17 16:54 185 Raw input data for analysis
[ ]jp_hHqirZe.jalview2015-04-17 17:56 4.4KJalview annotation file for alignment
[ ]jp_hHqirZe.jnet2015-04-17 17:56 6.5KJnet secondary structure output
[TXT]jp_hHqirZe.profile2015-04-17 17:53 29KPSIBLAST profile from alignment
[ ]jp_hHqirZe.pssm2015-04-17 17:56 38KPSIBLAST PSSM for Jnet
[TXT]jp_hHqirZe.results.html2016-02-15 12:20 81KJPred results page
[TXT]jp_hHqirZe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_hHqirZe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_hHqirZe.seq2015-04-17 16:54 193 Sequence data file
[TXT]jp_hHqirZe.simple.html2015-04-17 17:56 1.5KBrief HTML: sequence and prediction only
[TXT]jp_hHqirZe.svg.html2015-04-17 17:56 73KJalview SVG summary of results
[ ]jp_hHqirZe.tar.gz2015-04-17 17:57 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.