JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d2i9ia1.name2015-04-17 18:44 0 Job name flag file
[ ]jp_64Vq2wp.input2015-04-17 18:44 228 Raw input data for analysis
[ ]jp_64Vq2wp.fasta2015-04-17 20:47 237 Input query sequence in FASTA format
[ ]jp_64Vq2wp.seq2015-04-17 18:44 237 Sequence data file
[TXT]jp_64Vq2wp.coils.csv2015-04-17 20:53 1.3KCOILS output in CSV format
[TXT]jp_64Vq2wp.simple.html2015-04-17 20:53 1.6KBrief HTML: sequence and prediction only
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]jp_64Vq2wp.als2015-04-17 20:53 3.0KAlscript command file for PS/PDF output
[TXT]LOG2015-04-17 20:53 4.7KJPred server log file
[ ]jp_64Vq2wp.jalview2015-04-17 20:53 5.3KJalview annotation file for alignment
[ ]jp_64Vq2wp.jnet2015-04-17 20:53 8.1KJnet secondary structure output
[ ]jp_64Vq2wp.coilseq.lupas_142015-04-17 20:53 9.3KCOILS output, window length 14
[ ]jp_64Vq2wp.coilseq.lupas_212015-04-17 20:53 9.3KCOILS output, window length 21
[ ]jp_64Vq2wp.coilseq.lupas_282015-04-17 20:53 9.3KCOILS output, window length 28
[ ]jp_64Vq2wp.align2015-04-17 20:53 10KPSIBLAST alignment in FASTA format
[ ]jp_64Vq2wp.concise.fasta2015-04-17 20:53 13KPrediction: coiled-coil, solvent, alignment
[TXT]jp_64Vq2wp.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_64Vq2wp.concise.blc2015-04-17 20:53 14KBLC format prediction and alignment data
[TXT]jp_64Vq2wp.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_64Vq2wp.full_MSA.fasta.noGaps.html2015-04-17 20:53 26KFull MSA before JPred filters in FASTA
[ ]jp_64Vq2wp.concise2015-04-17 20:53 29KPrediction: coiled-coil, solvent, alignment
[ ]jp_64Vq2wp.blast.gz2015-04-17 20:53 30KCompressed PSIBLAST output file
[ ]jp_64Vq2wp.full_MSA.fasta2015-04-17 20:53 34KFull MSA before JPred filters in FASTA
[TXT]jp_64Vq2wp.profile2015-04-17 20:51 35KPSIBLAST profile from alignment
[TXT]jp_64Vq2wp.html2015-04-17 20:53 39KHTML prediction and alignment data
[ ]jp_64Vq2wp.hmm2015-04-17 20:53 41KHHMer2 profile of the alignment
[ ]jp_64Vq2wp.pssm2015-04-17 20:53 47KPSIBLAST PSSM for Jnet
[TXT]jp_64Vq2wp.svg.html2015-04-17 20:53 87KJalview SVG summary of results
[ ]jp_64Vq2wp.concise.pdf2015-04-17 20:53 89KPDF prediction and alignment data
[TXT]jp_64Vq2wp.results.html2016-02-15 12:20 96KJPred results page
[TXT]jp_64Vq2wp.full_MSA.fasta.withGaps.html2015-04-17 20:53 133KFull MSA before JPred filters in FASTA
[ ]jp_64Vq2wp.tar.gz2015-04-17 20:53 199KArchive containing complete results
[ ]jp_64Vq2wp.concise.ps2015-04-17 20:53 1.6MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.