JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:51 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2iaya1.name2015-04-17 18:44 0 Job name flag file
[ ]jp_UrTLfue.align2015-04-17 20:51 13KPSIBLAST alignment in FASTA format
[TXT]jp_UrTLfue.als2015-04-17 20:51 2.7KAlscript command file for PS/PDF output
[ ]jp_UrTLfue.blast.gz2015-04-17 20:51 37KCompressed PSIBLAST output file
[TXT]jp_UrTLfue.coils.csv2015-04-17 20:51 708 COILS output in CSV format
[ ]jp_UrTLfue.coilseq.lupas_142015-04-17 20:51 4.7KCOILS output, window length 14
[ ]jp_UrTLfue.coilseq.lupas_212015-04-17 20:51 4.7KCOILS output, window length 21
[ ]jp_UrTLfue.coilseq.lupas_282015-04-17 20:51 4.7KCOILS output, window length 28
[ ]jp_UrTLfue.concise2015-04-17 20:51 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_UrTLfue.concise.blc2015-04-17 20:51 15KBLC format prediction and alignment data
[ ]jp_UrTLfue.concise.fasta2015-04-17 20:51 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_UrTLfue.concise.pdf2015-04-17 20:51 94KPDF prediction and alignment data
[ ]jp_UrTLfue.concise.ps2015-04-17 20:51 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_UrTLfue.fasta2015-04-17 20:47 127 Input query sequence in FASTA format
[ ]jp_UrTLfue.full_MSA.fasta2015-04-17 20:51 23KFull MSA before JPred filters in FASTA
[TXT]jp_UrTLfue.full_MSA.fasta.noGaps.html2015-04-17 20:51 42KFull MSA before JPred filters in FASTA
[TXT]jp_UrTLfue.full_MSA.fasta.withGaps.html2015-04-17 20:51 68KFull MSA before JPred filters in FASTA
[ ]jp_UrTLfue.hmm2015-04-17 20:51 21KHHMer2 profile of the alignment
[TXT]jp_UrTLfue.html2015-04-17 20:51 43KHTML prediction and alignment data
[ ]jp_UrTLfue.input2015-04-17 18:44 120 Raw input data for analysis
[ ]jp_UrTLfue.jalview2015-04-17 20:51 3.1KJalview annotation file for alignment
[ ]jp_UrTLfue.jnet2015-04-17 20:51 4.2KJnet secondary structure output
[TXT]jp_UrTLfue.profile2015-04-17 20:50 18KPSIBLAST profile from alignment
[ ]jp_UrTLfue.pssm2015-04-17 20:51 24KPSIBLAST PSSM for Jnet
[TXT]jp_UrTLfue.results.html2016-02-15 12:20 55KJPred results page
[TXT]jp_UrTLfue.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_UrTLfue.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_UrTLfue.seq2015-04-17 18:44 127 Sequence data file
[TXT]jp_UrTLfue.simple.html2015-04-17 20:51 1.3KBrief HTML: sequence and prediction only
[TXT]jp_UrTLfue.svg.html2015-04-17 20:51 47KJalview SVG summary of results
[ ]jp_UrTLfue.tar.gz2015-04-17 20:51 201KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.