A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:54 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2icua_.name | 2015-04-17 18:44 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_ZkgzrrT.align | 2015-04-17 20:53 | 274K | PSIBLAST alignment in FASTA format |
| jp_ZkgzrrT.als | 2015-04-17 20:53 | 3.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_ZkgzrrT.blast.gz | 2015-04-17 20:52 | 4.6M | Compressed PSIBLAST output file |
| jp_ZkgzrrT.coils.csv | 2015-04-17 20:53 | 1.3K | COILS output in CSV format |
| jp_ZkgzrrT.coilseq.lupas_14 | 2015-04-17 20:53 | 8.8K | COILS output, window length 14 |
| jp_ZkgzrrT.coilseq.lupas_21 | 2015-04-17 20:53 | 8.8K | COILS output, window length 21 |
| jp_ZkgzrrT.coilseq.lupas_28 | 2015-04-17 20:53 | 8.8K | COILS output, window length 28 |
| jp_ZkgzrrT.concise | 2015-04-17 20:53 | 537K | Prediction: coiled-coil, solvent, alignment |
| jp_ZkgzrrT.concise.blc | 2015-04-17 20:53 | 273K | BLC format prediction and alignment data |
| jp_ZkgzrrT.concise.fasta | 2015-04-17 20:53 | 276K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_ZkgzrrT.concise.pdf | 2015-04-17 20:53 | 1.8M | PDF prediction and alignment data |
| jp_ZkgzrrT.concise.ps | 2015-04-17 20:53 | 33M | Prediction: coiled-coil, solvent, alignment |
| jp_ZkgzrrT.fasta | 2015-04-17 20:48 | 225 | Input query sequence in FASTA format |
| jp_ZkgzrrT.full_MSA.fasta | 2015-04-17 20:52 | 9.1M | Full MSA before JPred filters in FASTA |
| jp_ZkgzrrT.full_MSA.fasta.noGaps.html | 2015-04-17 20:54 | 1.0M | Full MSA before JPred filters in FASTA |
| jp_ZkgzrrT.full_MSA.fasta.withGaps.html | 2015-04-17 20:54 | 23M | Full MSA before JPred filters in FASTA |
| jp_ZkgzrrT.hmm | 2015-04-17 20:53 | 39K | HHMer2 profile of the alignment |
| jp_ZkgzrrT.html | 2015-04-17 20:53 | 519K | HTML prediction and alignment data |
| jp_ZkgzrrT.input | 2015-04-17 18:44 | 217 | Raw input data for analysis |
| jp_ZkgzrrT.jalview | 2015-04-17 20:53 | 4.9K | Jalview annotation file for alignment |
| jp_ZkgzrrT.jnet | 2015-04-17 20:53 | 7.7K | Jnet secondary structure output |
| jp_ZkgzrrT.profile | 2015-04-17 20:51 | 34K | PSIBLAST profile from alignment |
| jp_ZkgzrrT.pssm | 2015-04-17 20:53 | 45K | PSIBLAST PSSM for Jnet |
| jp_ZkgzrrT.results.html | 2016-02-15 12:20 | 91K | JPred results page |
| jp_ZkgzrrT.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_ZkgzrrT.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_ZkgzrrT.seq | 2015-04-17 18:44 | 225 | Sequence data file |
| jp_ZkgzrrT.simple.html | 2015-04-17 20:53 | 1.6K | Brief HTML: sequence and prediction only |
![[TXT]](jp_ZkgzrrT.svg.html) | jp_ZkgzrrT.svg.html | 2015-04-17 20:54 | 83K | Jalview SVG summary of results |
| jp_ZkgzrrT.tar.gz | 2015-04-17 20:54 | 9.2M | Archive containing complete results |
